RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 PDE12Q6L8Q7 609 aaKnown RBP25.34■■□□□ 1.65
CTF1-202ENST00000395019 SLC39A13Q96H72 371 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 EMILIN2Q9BXX0 1053 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 CYP4F11Q9HBI6 524 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 USP29Q9HBJ7 922 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 DTLQ9NZJ0 730 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 OR12D3Q9UGF7 316 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 TLR6Q9Y2C9 796 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 ZNF638Q14966 1978 aaKnown RBP25.34■■□□□ 1.65
CTF1-202ENST00000395019 KCNU1A8MYU2 1149 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 SPDYCQ5MJ68 293 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 HIBCHQ6NVY1 386 aaPredicted RBP25.34■■□□□ 1.65
CTF1-202ENST00000395019 CDKL3Q8IVW4 592 aaPredicted RBP25.34■■□□□ 1.65
CTF1-202ENST00000395019 FAM71DQ8N9W8 422 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 OVCA2Q8WZ82 227 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 RTP4Q96DX8 246 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 MFHAS1Q9Y4C4 1052 aa25.34■■□□□ 1.65
CTF1-202ENST00000395019 ERCC2P18074 760 aa25.33■■□□□ 1.65
CTF1-202ENST00000395019 RPL22P35268 128 aaKnown RBP25.33■■□□□ 1.65
CTF1-202ENST00000395019 CLCN4P51793 760 aa25.33■■□□□ 1.65
CTF1-202ENST00000395019 SLC45A4Q5BKX6 768 aa25.33■■□□□ 1.65
CTF1-202ENST00000395019 LILRA6Q6PI73 481 aa25.33■■□□□ 1.65
CTF1-202ENST00000395019 ZNF276Q8N554 614 aa25.33■■□□□ 1.65
CTF1-202ENST00000395019 OLFM3Q96PB7 478 aa25.33■■□□□ 1.65
CTF1-202ENST00000395019 ADAM7Q9H2U9 754 aa25.33■■□□□ 1.65
CTF1-202ENST00000395019 TPX2Q9ULW0 747 aaKnown RBP25.33■■□□□ 1.65
CTF1-202ENST00000395019 MAGED2Q9UNF1 606 aaPredicted RBP25.33■■□□□ 1.65
CTF1-202ENST00000395019 YIPF1Q9Y548 306 aa25.33■■□□□ 1.65
CTF1-202ENST00000395019 SNX10Q9Y5X0 201 aa25.33■■□□□ 1.65
CTF1-202ENST00000395019 PRUNE2Q8WUY3 3088 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 HACD1B0YJ81 288 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 LRIG2O94898 1065 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 ADH1AP07327 375 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 CSH1P0DML2 217 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 CSH2P0DML3 217 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 SLC2A3P11169 496 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 ALDH1A3P47895 512 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 NRIP1P48552 1158 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 IQCKQ8N0W5 287 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 PDZD8Q8NEN9 1154 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 QKIQ96PU8 341 aaKnown RBP eCLIP25.32■■□□□ 1.64
CTF1-202ENST00000395019 TSPYL1Q9H0U9 437 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 MTCH2Q9Y6C9 303 aa25.32■■□□□ 1.64
CTF1-202ENST00000395019 GOLGA6BA6NDN3 693 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 MFSD11O43934 449 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 PAGE1O75459 146 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 MAP3K6O95382 1288 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 EPCAMP16422 314 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 HMGA1P17096 107 aaKnown RBP25.31■■□□□ 1.64
CTF1-202ENST00000395019 RBL1P28749 1068 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 HTR7P34969 479 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 HSD17B3P37058 310 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 TBX4P57082 545 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 EFEMP1Q12805 493 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 GPS2Q13227 327 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 SLMAPQ14BN4 828 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 TCEAL5Q5H9L2 206 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 CFAP58Q5T655 872 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 SNX30Q5VWJ9 437 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 TCEAL8Q8IYN2 117 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 VN1R2Q8NFZ6 395 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 FCRL2Q96LA5 508 aaPredicted RBP25.31■■□□□ 1.64
CTF1-202ENST00000395019 FOXP3Q9BZS1 431 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 TLE6Q9H808 572 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 RAD54BQ9Y620 910 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 DOCK6Q96HP0 2047 aa25.31■■□□□ 1.64
CTF1-202ENST00000395019 KCNN4O15554 427 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 ELF1P32519 619 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 TRIP4Q15650 581 aaPredicted RBP25.3■■□□□ 1.64
CTF1-202ENST00000395019 UAP1Q16222 522 aaPredicted RBP25.3■■□□□ 1.64
CTF1-202ENST00000395019 DUSP6Q16828 381 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 PDZD4Q76G19 769 aaPredicted RBP25.3■■□□□ 1.64
CTF1-202ENST00000395019 B4GALNT4Q76KP1 1039 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 PCGF5Q86SE9 256 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 KRT222Q8N1A0 295 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 SLC22A17Q8WUG5 538 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 MYRFLQ96LU7 910 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 CDK5RAP1Q96SZ6 601 aaKnown RBP25.3■■□□□ 1.64
CTF1-202ENST00000395019 MARCH2Q9P0N8 246 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 ATP8A1Q9Y2Q0 1164 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.3■■□□□ 1.64
CTF1-202ENST00000395019 NRG1Q02297 640 aaPredicted RBP25.3■■□□□ 1.64
CTF1-202ENST00000395019 MORF4L2Q15014 288 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 C10orf120Q5SQS8 335 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 RNASEH2BQ5TBB1 312 aaKnown RBP25.3■■□□□ 1.64
CTF1-202ENST00000395019 NSUN3Q9H649 340 aaKnown RBP25.3■■□□□ 1.64
CTF1-202ENST00000395019 HCFC2Q9Y5Z7 792 aa25.3■■□□□ 1.64
CTF1-202ENST00000395019 C5orf42Q9H799 3197 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 AGPSO00116 658 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 TLR5O60602 858 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 TBX18O95935 607 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 IGFBP4P22692 258 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 EPHB2P29323 1055 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 HOXC13P31276 330 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 PMS2P54278 862 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 HYAL1Q12794 435 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 PDK1Q15118 436 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 MANEALQ5VSG8 457 aa25.29■■□□□ 1.64
CTF1-202ENST00000395019 TRMT2BQ96GJ1 504 aaKnown RBP25.29■■□□□ 1.64
CTF1-202ENST00000395019 C1orf74Q96LT6 269 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms