RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 COPS5Q92905 334 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 SLC10A4Q96EP9 437 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 FAXDC2Q96IV6 333 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 PRDM16Q9HAZ2 1276 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 GPAMQ9HCL2 828 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 KLK14Q9P0G3 267 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 BTBD7Q9P203 1132 aa11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 ZMYND8Q9ULU4 1186 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-209ENST00000394804 TRPC5OSA6NMA1 111 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 E7ESA3 106 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 TBX10O75333 385 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 GLRBP48167 497 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 SP2Q02086 613 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 ANO7Q6IWH7 933 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 ATPAF2Q8N5M1 289 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 IPMKQ8NFU5 416 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 AFG1LQ8WV93 481 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 MROH8Q9H579 483 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 ANLNQ9NQW6 1124 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 NOD1Q9Y239 953 aa11.96□□□□□ -0.49
UBE2D3-209ENST00000394804 RRN3P2A6NIE6 340 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 KLF11O14901 512 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 NCAM2O15394 837 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 ATP6V1B1P15313 513 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 ADIGQ0VDE8 80 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 KCNJ11Q14654 390 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 ADGRF2Q8IZF7 708 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 OR6P1Q8NGX9 317 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 PBXIP1Q96AQ6 731 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 C12orf42Q96LP6 360 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 GPR20Q99678 358 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 ARHGEF38Q9NXL2 777 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 H3BRB1 525 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 GPR25O00155 361 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 MDM4O15151 490 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 CYP2C9P11712 490 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 CCDC130P13994 396 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 HADHAP40939 763 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 GPD2P43304 727 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 NEK3P51956 506 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 GHRHRQ02643 423 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 ZNF252P-AS1Q0IIN9 211 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 PRKAA1Q13131 559 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 SLC2A14Q8TDB8 520 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 DDX50Q9BQ39 737 aaKnown RBP11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 TUT1Q9H6E5 874 aaKnown RBP11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 NMRAL1Q9HBL8 299 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 RUVBL2Q9Y230 463 aaKnown RBP11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 WASF2Q9Y6W5 498 aa11.96□□□□□ -0.5
UBE2D3-209ENST00000394804 MAGEB16A2A368 324 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 USP12O75317 370 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 UPP2O95045 317 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 CSH1P0DML2 217 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 CSH2P0DML3 217 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 GOT1P17174 413 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 PRAMEP78395 509 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 SH3PXD2AQ5TCZ1 1133 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 TRMT10BQ6PF06 316 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 KCNMB4Q86W47 210 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 SNX32Q86XE0 403 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 C10orf107Q8IVU9 208 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 PCDH19Q8TAB3 1148 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 OLIG1Q8TAK6 271 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 SGF29Q96ES7 293 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 CNBD2Q96M20 576 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 LGMNQ99538 433 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 TRIM62Q9BVG3 475 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 RNPEPQ9H4A4 650 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 PDLIM7Q9NR12 457 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 ADAM28Q9UKQ2 775 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 USP1O94782 785 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 CLPTM1O96005 669 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 ZNF286BP0CG31 522 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 MLNP12872 115 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 STX5Q13190 355 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 ERO1BQ86YB8 467 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 KIAA0319LQ8IZA0 1049 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 MAGEB5Q9BZ81 275 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 ACOT9Q9Y305 439 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 SLC15A5A6NIM6 579 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 PFDN6O15212 129 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 ARF4P18085 180 aaPredicted RBP11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 PMLP29590 882 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 AVPR1AP37288 418 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 RNF220Q5VTB9 566 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 LBX2Q6XYB7 198 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 ANKRD13AQ8IZ07 590 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 HSFY1Q96LI6 401 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 PRDM12Q9H4Q4 367 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 PNPOQ9NVS9 261 aa11.95□□□□□ -0.5
UBE2D3-209ENST00000394804 RNF103-CHMP3A0A140T963 221 aa11.94□□□□□ -0.5
UBE2D3-209ENST00000394804 ARHGEF37A1IGU5 675 aa11.94□□□□□ -0.5
UBE2D3-209ENST00000394804 JCHAINP01591 159 aa11.94□□□□□ -0.5
UBE2D3-209ENST00000394804 LGALS2P05162 132 aa11.94□□□□□ -0.5
UBE2D3-209ENST00000394804 COX4I1P13073 169 aa11.94□□□□□ -0.5
UBE2D3-209ENST00000394804 PRKAA2P54646 552 aa11.94□□□□□ -0.5
UBE2D3-209ENST00000394804 SLC27A1Q6PCB7 646 aa11.94□□□□□ -0.5
UBE2D3-209ENST00000394804 KDELC2Q7Z4H8 507 aa11.94□□□□□ -0.5
UBE2D3-209ENST00000394804 BBS5Q8N3I7 341 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms