RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 ELF1P32519 619 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 CRHR1P34998 444 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 C1QTNF8P60827 252 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 FAM72AQ5TYM5 149 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 FAM72DQ6L9T8 149 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 CXCL17Q6UXB2 119 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 PDZD4Q76G19 769 aaPredicted RBP15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 MARK2Q7KZI7 788 aaKnown RBP15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 BHLHA9Q7RTU4 235 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 GPRIN1Q7Z2K8 1008 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 FAM72BQ86X60 149 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 ZNF567Q8N184 647 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 KIF2BQ8N4N8 673 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 INPP5DQ92835 1189 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 LPPQ93052 612 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 UPF3AQ9H1J1 476 aaKnown RBP15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 ZFYVE28Q9HCC9 887 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 ANLNQ9NQW6 1124 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 SAR1AQ9NR31 198 aa15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 TIMM13Q9Y5L4 95 aaPredicted RBP15.78■□□□□ 0.12
UBE2D3-207ENST00000394801 MYO18AQ92614 2054 aaKnown RBP15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 WDR27A2RRH5 827 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 TRAFD1O14545 582 aaPredicted RBP15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 NCAM2O15394 837 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 F9P00740 461 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 LTFP02788 710 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 CYBAP13498 195 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 ERCC2P18074 760 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 BGNP21810 368 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 PCSK1P29120 753 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 CTGFP29279 349 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 SLC8A1P32418 973 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 ZNF135P52742 658 aaPredicted RBP15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 CACNA2D1P54289 1103 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 NIPAL4Q0D2K0 466 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 INTS6LQ5JSJ4 861 aaKnown RBP15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 TRIM42Q8IWZ5 723 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 CCNYQ8ND76 341 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 RFWD2Q8NHY2 731 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 TMEM237Q96Q45 408 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 KCNK13Q9HB14 408 aa15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 ZNF638Q14966 1978 aaKnown RBP15.77■□□□□ 0.12
UBE2D3-207ENST00000394801 USP17L7P0C7H9 530 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 SCNN1GP51170 649 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 OVGP1Q12889 678 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 NAB1Q13506 487 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 BMPR2Q13873 1038 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 TIGD5Q53EQ6 642 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 SMARCD1Q96GM5 515 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 BRD8Q9H0E9 1235 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 SIRPGQ9P1W8 387 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 BAIAP2L1Q9UHR4 511 aa15.77■□□□□ 0.11
UBE2D3-207ENST00000394801 DLDP09622 509 aaKnown RBP15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 NCAM1P13591 858 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 PGAM1P18669 254 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 PSMB4P28070 264 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 CTC1Q2NKJ3 1217 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 STXBP5Q5T5C0 1151 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 MROH9Q5TGP6 573 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 PM20D1Q6GTS8 502 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 FAM171BQ6P995 826 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 SCML4Q8N228 414 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 NETO2Q8NC67 525 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 DEPDC1BQ8WUY9 529 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 IRGQQ8WZA9 623 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 SLC7A6OSQ96CW6 309 aaPredicted RBP15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 RTP3Q9BQQ7 232 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 COLEC11Q9BWP8 271 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 AGO3Q9H9G7 860 aaKnown RBP15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 MTO1Q9Y2Z2 717 aaKnown RBP15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 COL4A4P53420 1690 aaPredicted RBP15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 DNAJC6O75061 913 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 CTSHP09668 335 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 PSEN1P49768 467 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 RASSF2P50749 326 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 RABGGTBP53611 331 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 ARL13BQ3SXY8 428 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 ZNF449Q6P9G9 518 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 CLNKQ7Z7G1 428 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 MTDHQ86UE4 582 aaKnown RBP15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 TP53INP2Q8IXH6 220 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 RAB3IL1Q8TBN0 382 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 ADAM32Q8TC27 787 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 ACMSDQ8TDX5 336 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 CDKL2Q92772 493 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 C7orf26Q96N11 449 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 RAB3IPQ96QF0 476 aaPredicted RBP15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 ACBD6Q9BR61 282 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 PAAF1Q9BRP4 392 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 ZFP69BQ9UJL9 534 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 DCTN4Q9UJW0 460 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 SUFUQ9UMX1 484 aa15.76■□□□□ 0.11
UBE2D3-207ENST00000394801 AMHP03971 560 aa15.75■□□□□ 0.11
UBE2D3-207ENST00000394801 CYP11A1P05108 521 aa15.75■□□□□ 0.11
UBE2D3-207ENST00000394801 EZRP15311 586 aaKnown RBP15.75■□□□□ 0.11
UBE2D3-207ENST00000394801 MGAT1P26572 445 aa15.75■□□□□ 0.11
UBE2D3-207ENST00000394801 TARSP26639 723 aaKnown RBP15.75■□□□□ 0.11
UBE2D3-207ENST00000394801 CXCR3P49682 368 aa15.75■□□□□ 0.11
UBE2D3-207ENST00000394801 PPIDQ08752 370 aaKnown RBP15.75■□□□□ 0.11
UBE2D3-207ENST00000394801 IFRD2Q12894 506 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms