RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ZNF280DQ6N043 979 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 ZDHHC24Q6UX98 284 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 STRADAQ7RTN6 431 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 OTOP2Q7RTS6 562 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 MAP7D3Q8IWC1 876 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 DCP1BQ8IZD4 617 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 CCDC33Q8N5R6 958 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 PCDH19Q8TAB3 1148 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 FBXO25Q8TCJ0 367 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 TEKT4Q8WW24 435 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 NT5C3BQ969T7 300 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 LRRC45Q96CN5 670 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 RSRC1Q96IZ7 334 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 RUNDC3BQ96NL0 473 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 RNF157Q96PX1 679 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 NPY6RQ99463 290 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 TMEM175Q9BSA9 504 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 CNOT10Q9H9A5 744 aaKnown RBP7.19□□□□□ -1.26
RTN4-205ENST00000394609 TMBIM4Q9HC24 238 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 PIGVQ9NUD9 493 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 ZDHHC18Q9NUE0 388 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 DDIT4Q9NX09 232 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 STAP1Q9ULZ2 295 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 AP4E1Q9UPM8 1137 aa7.19□□□□□ -1.26
RTN4-205ENST00000394609 TTC3P53804 2025 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 SCN5AQ14524 2016 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 ZBBXA8MT70 800 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 SGK1O00141 431 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 MDM4O15151 490 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 IFNB1P01574 187 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 AMHP03971 560 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 CPB1P15086 417 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 RPL17P18621 184 aaKnown RBP7.18□□□□□ -1.26
RTN4-205ENST00000394609 EN2P19622 333 aaPredicted RBP7.18□□□□□ -1.26
RTN4-205ENST00000394609 NRLP54845 237 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 DRG2P55039 364 aaKnown RBP7.18□□□□□ -1.26
RTN4-205ENST00000394609 VCPP55072 806 aaKnown RBP7.18□□□□□ -1.26
RTN4-205ENST00000394609 PDK2Q15119 407 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 NFE2Q16621 373 aaPredicted RBP7.18□□□□□ -1.26
RTN4-205ENST00000394609 ANKRD20A8PQ5CZ79 823 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 PM20D1Q6GTS8 502 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 ZNF365Q70YC5 407 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 ZC3H18Q86VM9 953 aaKnown RBP7.18□□□□□ -1.26
RTN4-205ENST00000394609 PQLC3Q8N755 202 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 PLD5Q8N7P1 536 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 SLC35B2Q8TB61 432 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 GRK7Q8WTQ7 553 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 SLCO2A1Q92959 643 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 NKD2Q969F2 451 aaPredicted RBP7.18□□□□□ -1.26
RTN4-205ENST00000394609 TOP1MTQ969P6 601 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 FMO2Q99518 471 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 TTPALQ9BTX7 342 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 CRISPLD1Q9H336 500 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 CWH43Q9H720 699 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 EBF2Q9HAK2 575 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 MTMR10Q9NXD2 777 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.18□□□□□ -1.26
RTN4-205ENST00000394609 SLC12A6Q9UHW9 1150 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 NUDT5Q9UKK9 219 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 FZD10Q9ULW2 581 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 EFR3BQ9Y2G0 817 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 NEU2Q9Y3R4 380 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 PCDHB5Q9Y5E4 795 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 HEY1Q9Y5J3 304 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 USP3Q9Y6I4 520 aa7.18□□□□□ -1.26
RTN4-205ENST00000394609 TDRD15B5MCY1 1934 aaKnown RBP7.18□□□□□ -1.26
RTN4-205ENST00000394609 ABHD14A-ACY1A0A1B0GW23 586 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 OR6C75A6NL08 312 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 I6L893 689 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 APOC4-APOC2K7ER74 178 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 APOL1O14791 398 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 TP73O15350 636 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ADAM12O43184 909 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 KRT14P02533 472 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 APOC2P02655 101 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 MYZAPP0CAP1 466 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 ATF2P15336 505 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 GOT1P17174 413 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 AMPD1P23109 780 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 IVDP26440 423 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 RFC2P35250 354 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 GDF10P55107 478 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 EIF3EP60228 445 aaKnown RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 ELAVL2Q12926 359 aaKnown RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 DUSP4Q13115 394 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 PTK6Q13882 451 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 TFDP2Q14188 446 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 GAS6Q14393 721 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 OASLQ15646 514 aaKnown RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 DPYSL2Q16555 572 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 MGAT5BQ3V5L5 792 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 KIAA1841Q6NSI8 718 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 SYDE1Q6ZW31 735 aaPredicted RBP7.17□□□□□ -1.26
RTN4-205ENST00000394609 PRICKLE2Q7Z3G6 844 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 SCD5Q86SK9 330 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 CROCCP2Q86T23 111 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 CACNA2D3Q8IZS8 1091 aa7.17□□□□□ -1.26
RTN4-205ENST00000394609 TAB3Q8N5C8 712 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms