RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CEP57Q86XR8 500 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 PGAP3Q96FM1 320 aaPredicted RBP15.51■□□□□ 0.07
GPC3-202ENST00000394299 EBNA1BP2Q99848 306 aaKnown RBP15.51■□□□□ 0.07
GPC3-202ENST00000394299 NMUR1Q9HB89 426 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 ABCF3Q9NUQ8 709 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 FETUBQ9UGM5 382 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 MAGED2Q9UNF1 606 aaPredicted RBP15.51■□□□□ 0.07
GPC3-202ENST00000394299 IKBKGQ9Y6K9 419 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 MT-ND3P03897 115 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 PYGBP11216 843 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 TPSB2P20231 275 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 GRK4P32298 578 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 GLUD2P49448 558 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 HTRA3P83110 453 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 SCAPQ12770 1279 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 GPNMBQ14956 572 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 TPSAB1Q15661 275 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 CASC4Q6P4E1 433 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 BZW1Q7L1Q6 419 aaKnown RBP15.51■□□□□ 0.07
GPC3-202ENST00000394299 YTHDF3Q7Z739 585 aaKnown RBP15.51■□□□□ 0.07
GPC3-202ENST00000394299 COLGALT2Q8IYK4 626 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 TTC9BQ8N6N2 239 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 BANPQ8N9N5 519 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 DSEQ9UL01 958 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 CAPN7Q9Y6W3 813 aa15.51■□□□□ 0.07
GPC3-202ENST00000394299 CCT8L1PA6NM43 557 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 TNFRSF10BO14763 440 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 SOAT2O75908 522 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 APOEP02649 317 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 SKIP12755 728 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 MGAT1P26572 445 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 HOXD10P28358 340 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 PBX3P40426 434 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 DSC1Q08554 894 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 SCD5Q86SK9 330 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 CASP10Q92851 521 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 GORASP1Q9BQQ3 440 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 PITPNM3Q9BZ71 974 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 OSER1Q9NX31 292 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 SENP1Q9P0U3 644 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 SMG5Q9UPR3 1016 aaKnown RBP15.5■□□□□ 0.07
GPC3-202ENST00000394299 TRIM49D1C9J1S8 452 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 NBNO60934 754 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 OAS1P00973 400 aaKnown RBP15.5■□□□□ 0.07
GPC3-202ENST00000394299 F7P08709 466 aaPredicted RBP15.5■□□□□ 0.07
GPC3-202ENST00000394299 TSHRP16473 764 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 PTPN3P26045 913 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 TCTN1Q2MV58 587 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 ARL13BQ3SXY8 428 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 HHATQ5VTY9 493 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 RWDD4Q6NW29 188 aaKnown RBP15.5■□□□□ 0.07
GPC3-202ENST00000394299 ARHGAP36Q6ZRI8 547 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 CDHR3Q6ZTQ4 885 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 SH2D5Q6ZV89 423 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 DBF4BQ8NFT6 615 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 UROC1Q96N76 676 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 NSRP1Q9H0G5 558 aaKnown RBP15.5■□□□□ 0.07
GPC3-202ENST00000394299 PPCSQ9HAB8 311 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 PNPLA8Q9NP80 782 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 PCDHB8Q9UN66 801 aa15.5■□□□□ 0.07
GPC3-202ENST00000394299 USP15Q9Y4E8 981 aaPredicted RBP15.5■□□□□ 0.07
GPC3-202ENST00000394299 MOXD2PA6NHM9 499 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 NT5C1B-RDH14C9J2C7 533 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 PPP1R12AO14974 1030 aaPredicted RBP15.49■□□□□ 0.07
GPC3-202ENST00000394299 ZBTB24O43167 697 aaPredicted RBP15.49■□□□□ 0.07
GPC3-202ENST00000394299 EOMESO95936 686 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 FAM189BP81408 668 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 ZBTB17Q13105 803 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 SLC26A11Q86WA9 606 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 LRRC6Q86X45 466 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 ANKS4BQ8N8V4 417 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 ARNTL2Q8WYA1 636 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 OXNAD1Q96HP4 312 aaPredicted RBP15.49■□□□□ 0.07
GPC3-202ENST00000394299 HMX1Q9NP08 348 aaPredicted RBP15.49■□□□□ 0.07
GPC3-202ENST00000394299 UBP1Q9NZI7 540 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 KLHL8Q9P2G9 620 aaPredicted RBP15.49■□□□□ 0.07
GPC3-202ENST00000394299 CASP8AP2Q9UKL3 1982 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 F9P00740 461 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 PRKCHP24723 683 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 ARPP19P56211 112 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 MGAT5Q09328 741 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 FAM133BQ5BKY9 247 aaKnown RBP15.49■□□□□ 0.07
GPC3-202ENST00000394299 BTBD8Q5XKL5 378 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 C4orf22Q6V702 233 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 SPATA21Q7Z572 469 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 ATAD1Q8NBU5 361 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 USP33Q8TEY7 942 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 SH3TC2Q8TF17 1288 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 IRGQQ8WZA9 623 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 FRMD8Q9BZ67 464 aaPredicted RBP15.49■□□□□ 0.07
GPC3-202ENST00000394299 RASSF4Q9H2L5 321 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 NDFIP2Q9NV92 336 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 SQORQ9Y6N5 450 aa15.49■□□□□ 0.07
GPC3-202ENST00000394299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.48■□□□□ 0.07
GPC3-202ENST00000394299 IQANK1A0A1B0GTG1 560 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 A0A1W2PQH9 124 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 HMX2A2RU54 273 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 OPHN1O60890 802 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 CAPN15O75808 1086 aa15.48■□□□□ 0.07
GPC3-202ENST00000394299 TOMM70O94826 608 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms