RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 FBXW11Q9UKB1 542 aa11.46□□□□□ -0.58
TCOF1-203ENST00000394269 ZMYND8Q9ULU4 1186 aaPredicted RBP11.46□□□□□ -0.58
TCOF1-203ENST00000394269 E7ESA3 106 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 PQBP1O60828 265 aaKnown RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 GCATO75600 419 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 TBX18O95935 607 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 DCLRE1AQ6PJP8 1040 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 SLC24A5Q71RS6 500 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 MRPL10Q7Z7H8 261 aaKnown RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 SPATS2Q86XZ4 545 aaKnown RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 DQX1Q8TE96 717 aaKnown RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 MAGEB18Q96M61 343 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 CYLDQ9NQC7 956 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 EURLQ9NYK6 297 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 MPP6Q9NZW5 540 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 PHTF1Q9UMS5 762 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 CCL23P55773 120 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 NOMO2Q5JPE7 1267 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 CCSAPQ6IQ19 270 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 TRPM8Q7Z2W7 1104 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 TTC9BQ8N6N2 239 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 STAMBPL1Q96FJ0 436 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 SLC2A13Q96QE2 648 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 EPAS1Q99814 870 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 HMX1Q9NP08 348 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 SMYD2Q9NRG4 433 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 PCMTD2Q9NV79 361 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 PTCH2Q9Y6C5 1203 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 C2CD2LO14523 706 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 COPEO14579 308 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 ZBTB24O43167 697 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 ASMTLO95671 621 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 APOEP02649 317 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 RPL34P49207 117 aaKnown RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 CLLU1OSQ5K130 101 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 C6orf89Q6UWU4 347 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 PDZD4Q76G19 769 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 PIGWQ7Z7B1 504 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 DEFB128Q7Z7B8 93 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 SLC26A11Q86WA9 606 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 URGCPQ8TCY9 931 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 SEPT5Q99719 369 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 ATXN3LQ9H3M9 355 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 NPHS2Q9NP85 383 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 TBC1D13Q9NVG8 400 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 TXNDC16Q9P2K2 825 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 SMG5Q9UPR3 1016 aaKnown RBP11.45□□□□□ -0.58
TCOF1-203ENST00000394269 TRIM17Q9Y577 477 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 USP3Q9Y6I4 520 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 ZSWIM8A7E2V4 1837 aa11.45□□□□□ -0.58
TCOF1-203ENST00000394269 A0A1W2PQ45 241 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-203ENST00000394269 A0A1W2PQY0 241 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 C5orf60A6NFR6 353 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 HHLA1C9JL84 531 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 KRT37O76014 449 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 CSH1P0DML2 217 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 CSH2P0DML3 217 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 ERVK-10P10266 1014 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 CPB1P15086 417 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 GMPRP36959 345 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 XRCC4Q13426 336 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 FAM117BQ6P1L5 589 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 ARHGAP36Q6ZRI8 547 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 TFAP2DQ7Z6R9 452 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 TBC1D1Q86TI0 1168 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-203ENST00000394269 SCLYQ96I15 445 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 SIGLEC10Q96LC7 697 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 EBNA1BP2Q99848 306 aaKnown RBP11.44□□□□□ -0.58
TCOF1-203ENST00000394269 MECRQ9BV79 373 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 LRFN2Q9ULH4 789 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 SZT2Q5T011 3432 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 A0A1W2PQH9 124 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 SMAPO00193 183 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 SCNN1AP37088 669 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 PDE1BQ01064 536 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 WASHC5Q12768 1159 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 DSC3Q14574 896 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 MGAT5BQ3V5L5 792 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 TTC31Q49AM3 519 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-203ENST00000394269 CTXN3Q4LDR2 81 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 CD300LGQ6UXG3 332 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 OTOP3Q7RTS5 596 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 TDRPQ86YL5 185 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 KIF2BQ8N4N8 673 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 SLC44A1Q8WWI5 657 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 CASP10Q92851 521 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 NT5C3BQ969T7 300 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 RMDN2Q96LZ7 410 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 PPP1R12CQ9BZL4 782 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 HAUS2Q9NVX0 235 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 RPS6KL1Q9Y6S9 549 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 A0A0G2JND7 137 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 SDR42E2A6NKP2 422 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 DGKIO75912 1065 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 UBOX5O94941 541 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 SCTRP47872 440 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 EFEMP1Q12805 493 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 NDUFAF2Q8N183 169 aa11.44□□□□□ -0.58
TCOF1-203ENST00000394269 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms