RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FAM126BQ8IXS8 530 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 DNAJA4Q8WW22 397 aaPredicted RBP13.69□□□□□ -0.22
USP49-203ENST00000394253 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 IL18RAPO95256 599 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 IL18Q14116 193 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 DSG4Q86SJ6 1040 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 PSMD11O00231 422 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 IFRD1O00458 451 aaPredicted RBP13.69□□□□□ -0.22
USP49-203ENST00000394253 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 FNDC5Q8NAU1 212 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 SLC4A9Q96Q91 983 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 MEMO1Q9Y316 297 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 TMEM132DQ14C87 1099 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 HIPK1Q86Z02 1210 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 CCDC54Q8NEL0 328 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 S100PBPQ96BU1 408 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 PIF1Q9H611 641 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 IKZF3Q9UKT9 509 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 LEMD3Q9Y2U8 911 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 CROCC2H7BZ55 1655 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 TOP3BO95985 862 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 SERPINA3P01011 423 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 SLC1A6P48664 564 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 CDKL1Q00532 357 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 MTAPQ13126 283 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 ACAP1Q15027 740 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 KCNA10Q16322 511 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 MED8Q96G25 268 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 CROTQ9UKG9 612 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 DHX15O43143 795 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 CPSF4O95639 269 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 MNDAP41218 407 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 ATP2C1P98194 919 aaPredicted RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP49-203ENST00000394253 OR2L5Q8NG80 312 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 ABCC2Q92887 1545 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 FAM172BPA6NC97 362 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 PCSK1P29120 753 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 LACTB2Q53H82 288 aaPredicted RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 AADACL4Q5VUY2 407 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 ANO7Q6IWH7 933 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 PLCZ1Q86YW0 608 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 SCAIQ8N9R8 606 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 FLAD1Q8NFF5 587 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 BHMTQ93088 406 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 FAM49BQ9NUQ9 324 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 STAP2Q9UGK3 403 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 INVSQ9Y283 1065 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 ZBTB5O15062 677 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 KCNH1O95259 989 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 AVPR1AP37288 418 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 FAM71DQ8N9W8 422 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 PDGFCQ9NRA1 345 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 MORF4L1Q9UBU8 362 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 CMTR2Q8IYT2 770 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 EMC1Q8N766 993 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 METTL8Q9H825 291 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 CYP3A43Q9HB55 503 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 SCUBE2Q9NQ36 999 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 UBOX5O94941 541 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 RPL5P46777 297 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 VMACQ2NL98 169 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 KCNV1Q6PIU1 500 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 DEF8Q6ZN54 512 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 LRRC34Q8IZ02 419 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 LXNQ9BS40 222 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 MAGEB16A2A368 324 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 STAU1O95793 577 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 IDH2P48735 452 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 ZNF512Q96ME7 567 aaPredicted RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 TMEM117Q9H0C3 514 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 CLK4Q9HAZ1 481 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 NECTIN3Q9NQS3 549 aa13.68□□□□□ -0.22
USP49-203ENST00000394253 DDX20Q9UHI6 824 aaKnown RBP13.68□□□□□ -0.22
USP49-203ENST00000394253 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 CD4P01730 458 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 NR4A1P22736 598 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 CAV3P56539 151 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 ADAM17P78536 824 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 CCZ1BP86790 482 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 CCZ1P86791 482 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 DCAF6Q58WW2 860 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 PHF10Q8WUB8 498 aaKnown RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 TP53INP1Q96A56 240 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 SLC24A2Q9UI40 661 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 CORO1CQ9ULV4 474 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 PPIEQ9UNP9 301 aaKnown RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 C2orf71A6NGG8 1288 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 PLIN3O60664 434 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 CYP7B1O75881 506 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 MUTP22033 750 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms