RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 PARVAQ9NVD7 372 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 HSPBP1Q9NZL4 362 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 MEIS2O14770 477 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 IFNB1P01574 187 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 RPL22P35268 128 aaKnown RBP22.35■■□□□ 1.17
CLDND1-202ENST00000394180 ELK3P41970 407 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 PIGGQ5H8A4 983 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 MBLAC2Q68D91 279 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 C16orf46Q6P387 395 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 UBR7Q8N806 425 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 SEMA4DQ92854 862 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 APOL6Q9BWW8 343 aa22.35■■□□□ 1.17
CLDND1-202ENST00000394180 HEMK1Q9Y5R4 338 aaPredicted RBP22.35■■□□□ 1.17
CLDND1-202ENST00000394180 ALOX5P09917 674 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 ATF7P17544 494 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-202ENST00000394180 CDKN2BP42772 138 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 KRT80Q6KB66 452 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 CPXCR1Q8N123 301 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 TOP1MTQ969P6 601 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 ATG4CQ96DT6 458 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 CNDP1Q96KN2 507 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 ZNF778Q96MU6 729 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 COPS7BQ9H9Q2 264 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-202ENST00000394180 IPO11Q9UI26 975 aaKnown RBP22.34■■□□□ 1.17
CLDND1-202ENST00000394180 MYOCOSA0A1B0GUC4 107 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 XPOTO43592 962 aaKnown RBP22.34■■□□□ 1.17
CLDND1-202ENST00000394180 TMEM63AO94886 807 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 SERPINE1P05121 402 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 POLR2EP19388 210 aaKnown RBP22.34■■□□□ 1.17
CLDND1-202ENST00000394180 SLC1A6P48664 564 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 HNRNPFP52597 415 aaKnown RBP22.34■■□□□ 1.17
CLDND1-202ENST00000394180 MGAT5BQ3V5L5 792 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 BNC2Q6ZN30 1099 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-202ENST00000394180 SLC10A4Q96EP9 437 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 PKP2Q99959 881 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 ARPC5LQ9BPX5 153 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 RPF2Q9H7B2 306 aaKnown RBP22.34■■□□□ 1.17
CLDND1-202ENST00000394180 GPBP1L1Q9HC44 474 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-202ENST00000394180 EBF1Q9UH73 591 aa22.34■■□□□ 1.17
CLDND1-202ENST00000394180 TMEM114B3SHH9 223 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 KBTBD13C9JR72 458 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 SPTLC1O15269 473 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 TLR3O15455 904 aaKnown RBP22.33■■□□□ 1.17
CLDND1-202ENST00000394180 UGT1A9O60656 530 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 TFPTP0C1Z6 253 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 MCF2P10911 925 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 UGT1A6P19224 532 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 UGT1A1P22309 533 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 UGT1A4P22310 534 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 UGT1A3P35503 534 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 UGT1A5P35504 534 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 GRSF1Q12849 480 aaKnown RBP eCLIP22.33■■□□□ 1.17
CLDND1-202ENST00000394180 RFTN1Q14699 578 aaPredicted RBP22.33■■□□□ 1.17
CLDND1-202ENST00000394180 PDK1Q15118 436 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 PHKG1Q16816 387 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 ARL13BQ3SXY8 428 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 KAZNQ674X7 775 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 GADL1Q6ZQY3 521 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 POLNQ7Z5Q5 900 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 PDCD6IPQ8WUM4 868 aaKnown RBP22.33■■□□□ 1.17
CLDND1-202ENST00000394180 C1orf50Q9BV19 199 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 ZNF395Q9H8N7 513 aaPredicted RBP22.33■■□□□ 1.17
CLDND1-202ENST00000394180 UGT1A7Q9HAW7 530 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 UGT1A10Q9HAW8 530 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 UGT1A8Q9HAW9 530 aa22.33■■□□□ 1.17
CLDND1-202ENST00000394180 MRPL40Q9NQ50 206 aaKnown RBP22.33■■□□□ 1.17
CLDND1-202ENST00000394180 GSSP48637 474 aa22.33■■□□□ 1.16
CLDND1-202ENST00000394180 MRPS22P82650 360 aaKnown RBP22.33■■□□□ 1.16
CLDND1-202ENST00000394180 KLF10Q13118 480 aa22.33■■□□□ 1.16
CLDND1-202ENST00000394180 LYSMD3Q7Z3D4 306 aa22.33■■□□□ 1.16
CLDND1-202ENST00000394180 KYQ8NBH2 561 aa22.33■■□□□ 1.16
CLDND1-202ENST00000394180 PTCD2Q8WV60 388 aaKnown RBP22.33■■□□□ 1.16
CLDND1-202ENST00000394180 SREK1Q8WXA9 508 aaKnown RBP22.33■■□□□ 1.16
CLDND1-202ENST00000394180 LRRC39Q96DD0 335 aa22.33■■□□□ 1.16
CLDND1-202ENST00000394180 DUS3LQ96G46 650 aaKnown RBP22.33■■□□□ 1.16
CLDND1-202ENST00000394180 TUBA1CQ9BQE3 449 aa22.33■■□□□ 1.16
CLDND1-202ENST00000394180 FERMT1Q9BQL6 677 aa22.33■■□□□ 1.16
CLDND1-202ENST00000394180 RAVER2Q9HCJ3 691 aaKnown RBP22.33■■□□□ 1.16
CLDND1-202ENST00000394180 A0A0G2JLL6 359 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-202ENST00000394180 CFAP99D6REC4 459 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 FAM86B1E9PN63 330 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 ZNF195O14628 629 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 FAM86B2P0C5J1 330 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 TCF7P36402 384 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-202ENST00000394180 GAD2Q05329 585 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 IKBKEQ14164 716 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 EGFLAMQ63HQ2 1017 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 CATSPERGQ6ZRH7 1159 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 PRRT2Q7Z6L0 340 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-202ENST00000394180 FIBCD1Q8N539 461 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 GSDMBQ8TAX9 411 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 RSAD2Q8WXG1 361 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 MROQ9BYG7 248 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 CAAP1Q9H8G2 361 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 SLC38A10Q9HBR0 1119 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 MAN1C1Q9NR34 630 aa22.32■■□□□ 1.16
CLDND1-202ENST00000394180 XPO1O14980 1071 aaKnown RBP22.31■■□□□ 1.16
CLDND1-202ENST00000394180 CHADO15335 359 aa22.31■■□□□ 1.16
CLDND1-202ENST00000394180 JAK1P23458 1154 aa22.31■■□□□ 1.16
CLDND1-202ENST00000394180 HARS2P49590 506 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms