RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 PRSS56P0CW18 603 aa8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 ATF2P15336 505 aa8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 MCM3P25205 808 aa8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 DENND2CQ68D51 928 aa8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.72□□□□□ -1.011e-6■■□□□ 13.8
GAPVD1-204ENST00000394083 DENND5BQ6ZUT9 1274 aa8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 CLEC14AQ86T13 490 aa8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 MAPK15Q8TD08 544 aa8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 SH3TC2Q8TF17 1288 aa8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 SYBUQ9NX95 663 aa8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 ZFC3H1O60293 1989 aaKnown RBP8.72□□□□□ -1.01
GAPVD1-204ENST00000394083 COL4A2P08572 1712 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 TNPO2O14787 897 aaKnown RBP8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 GPR39O43194 453 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 ERCC2P18074 760 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 SLC6A4P31645 630 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 CHRNA4P43681 627 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 SCTRP47872 440 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 ACAP1Q15027 740 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 STRADAQ7RTN6 431 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 CIR1Q86X95 450 aaPredicted RBP8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 VSIG1Q86XK7 387 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 C10orf67Q8IYJ2 551 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 PDCD7Q8N8D1 485 aaKnown RBP8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 KCTD6Q8NC69 237 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 RNF139Q8WU17 664 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 RBM41Q96IZ5 413 aaKnown RBP8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 FCRL2Q96LA5 508 aaPredicted RBP8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 COLEC11Q9BWP8 271 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 FBXO6Q9NRD1 293 aaPredicted RBP8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 TBC1D13Q9NVG8 400 aa8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 NKX1-2Q9UD57 310 aaPredicted RBP8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 DSPP15924 2871 aaKnown RBP8.71□□□□□ -1.01
GAPVD1-204ENST00000394083 NT5C1B-RDH14C9J2C7 533 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 PRAMEF12O95522 483 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 BRAFP15056 766 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 THPOP40225 353 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 CPT1AP50416 773 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 IFT88Q13099 833 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 SLC45A4Q5BKX6 768 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 ANKRD20A2Q5SQ80 823 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 ANKRD20A1Q5TYW2 823 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 ANKRD20A3Q5VUR7 823 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 C16orf59Q7L2K0 433 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 LRRC45Q96CN5 670 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 CHMP6Q96FZ7 201 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 TMEM237Q96Q45 408 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 EBF4Q9BQW3 602 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 FTHL17Q9BXU8 183 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 XPNPEP3Q9NQH7 507 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 PRDM5Q9NQX1 630 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 POLR3BQ9NW08 1133 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 TRPV2Q9Y5S1 764 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 DAB1O75553 588 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 SCNN1AP37088 669 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 RGS2P41220 211 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 RGRP47804 291 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 BCAT1P54687 386 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 PTPRCAPQ14761 206 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 PPIL6Q8IXY8 311 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 GLDCP23378 1020 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 TAF6P49848 677 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 ACTN3Q08043 901 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 OVGP1Q12889 678 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 BNIP1Q12981 228 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 CERCAMQ5T4B2 595 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 RFX8Q6ZV50 586 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 TADA2BQ86TJ2 420 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 CNPY4Q8N129 248 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 SP110Q9HB58 689 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 RAB6BQ9NRW1 208 aa8.71□□□□□ -1.02
GAPVD1-204ENST00000394083 CAPN14A8MX76 684 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 GOLGA8TH3BQL2 631 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 EDF1O60869 148 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 SNNO75324 88 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 KCNA5P22460 613 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 NR1H3Q13133 447 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 PDE1CQ14123 709 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 SEMA3AQ14563 771 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 DDR2Q16832 855 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 SYDE1Q6ZW31 735 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 CEP97Q8IW35 865 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 DQX1Q8TE96 717 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 SCLYQ96I15 445 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 SLC45A3Q96JT2 553 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 PRICKLE1Q96MT3 831 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 MYLK2Q9H1R3 596 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 CWH43Q9H720 699 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 MBD1Q9UIS9 605 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 STRIP2Q9ULQ0 834 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 GOLGA6L7A0A1B0GV03 622 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 WDR27A2RRH5 827 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 SEC24AO95486 1093 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 FGF3P11487 239 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 HIF1AQ16665 826 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 INTS6LQ5JSJ4 861 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 TWF2Q6IBS0 349 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 RNF19BQ6ZMZ0 732 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 TMEM135Q86UB9 458 aa8.7□□□□□ -1.02
GAPVD1-204ENST00000394083 NAT14Q8WUY8 206 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms