RNA–Protein interactions for RNA: ENST00000393230.6

NRF1-204, Transcript of nuclear respiratory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NRF1, Length 3,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1-204ENST00000393230 UBP1Q9NZI7 540 aa11.2□□□□□ -0.62
NRF1-204ENST00000393230 GIT1Q9Y2X7 761 aa11.2□□□□□ -0.62
NRF1-204ENST00000393230 CLDN5O00501 218 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 C2CD2LO14523 706 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 PEX11AO75192 247 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 PGK1P00558 417 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 THP07101 528 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 ZFXP17010 805 aaPredicted RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 NCF2P19878 526 aaPredicted RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 MLH1P40692 756 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 PTDSS1P48651 473 aaKnown RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 FLT3LGP49771 235 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 SLC45A4Q5BKX6 768 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 GDF6Q6KF10 455 aaPredicted RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 RINLQ6ZS11 566 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 CYP4V2Q6ZWL3 525 aaPredicted RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 CCDC185Q8N715 623 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 ALKBH8Q96BT7 664 aaKnown RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 NAF1Q96HR8 494 aaKnown RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 HHIPL1Q96JK4 782 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 SMYD2Q9NRG4 433 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 TIMM13Q9Y5L4 95 aaPredicted RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 ATP9BO43861 1147 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 CALB2P22676 271 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 LHX1P48742 406 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 UBAP2LQ14157 1087 aaKnown RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 TSNAXIP1Q2TAA8 658 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 KDELC2Q7Z4H8 507 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 PQLC3Q8N755 202 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.621e-6■■□□□ 11.7
NRF1-204ENST00000393230 OXNAD1Q96HP4 312 aaPredicted RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 DUSP16Q9BY84 665 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 NRDE2Q9H7Z3 1164 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.19□□□□□ -0.62
NRF1-204ENST00000393230 PACSIN3Q9UKS6 424 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 CASP8AP2Q9UKL3 1982 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 ENO4A6NNW6 628 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 TOMM70O94826 608 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 MGAT1P26572 445 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 CTGFP29279 349 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 SULT1E1P49888 294 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 PITX1P78337 314 aaPredicted RBP11.19□□□□□ -0.62
NRF1-204ENST00000393230 STRADAQ7RTN6 431 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 PID1Q7Z2X4 250 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 FBXO27Q8NI29 283 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 MIEF2Q96C03 454 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 EBF2Q9HAK2 575 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 XPNPEP3Q9NQH7 507 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 KANSL3Q9P2N6 904 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 TEX264Q9Y6I9 313 aa11.19□□□□□ -0.62
NRF1-204ENST00000393230 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 CTSHP09668 335 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 NPR3P17342 541 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 PTPN1P18031 435 aaKnown RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 RPL9P32969 192 aaKnown RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 PGGT1BP53609 377 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 HDAC4P56524 1084 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 CDK16Q00536 496 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 C4orf22Q6V702 233 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 TP53INP2Q8IXH6 220 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 CENPIQ92674 756 aaPredicted RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 LRRC4Q9HBW1 653 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 APOEP02649 317 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 ERVK-10P10266 1014 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 PAX3P23760 479 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 ATXN3P54252 364 aaPredicted RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 SLC10A2Q12908 348 aaPredicted RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 STX3Q13277 289 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 PEX6Q13608 980 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 KCNJ11Q14654 390 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 PPM1JQ5JR12 505 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 ISLR2Q6UXK2 745 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 CAND1Q86VP6 1230 aaKnown RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 OSTM1Q86WC4 334 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 PCSK9Q8NBP7 692 aaKnown RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 MAGEC3Q8TD91 643 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 WDR60Q8WVS4 1066 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 SENP8Q96LD8 212 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 EBF4Q9BQW3 602 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 FRMD8Q9BZ67 464 aaPredicted RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 USP29Q9HBJ7 922 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 KLHL8Q9P2G9 620 aaPredicted RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 STAP1Q9ULZ2 295 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 GABRDO14764 452 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 DAB1O75553 588 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 ZMPSTE24O75844 475 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 ALADP13716 330 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 TSHRP16473 764 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 ADIGQ0VDE8 80 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 DPYSL2Q16555 572 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 WSCD1Q658N2 575 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 SLC9A4Q6AI14 798 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 PIGZQ86VD9 579 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 PSTKQ8IV42 348 aaKnown RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 CDKL3Q8IVW4 592 aaPredicted RBP11.18□□□□□ -0.62
NRF1-204ENST00000393230 LMNTD2Q8IXW0 634 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 SIX6OS1Q8N1H7 587 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 TEX9Q8N6V9 391 aa11.18□□□□□ -0.62
NRF1-204ENST00000393230 KCTD13Q8WZ19 329 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms