RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 MTMR14Q8NCE2 650 aa15.05■□□□□ 0
VPS9D1-201ENST00000389386 CDRT15Q96T59 188 aa15.05■□□□□ 0
VPS9D1-201ENST00000389386 FAM96AQ9H5X1 160 aa15.05■□□□□ 0
VPS9D1-201ENST00000389386 PNPLA3Q9NST1 481 aa15.05■□□□□ 0
VPS9D1-201ENST00000389386 GNPTGQ9UJJ9 305 aa15.05■□□□□ 0
VPS9D1-201ENST00000389386 CNOT3O75175 753 aaKnown RBP15.05■□□□□ -0
VPS9D1-201ENST00000389386 RNASEH2AO75792 299 aaKnown RBP15.05■□□□□ -0
VPS9D1-201ENST00000389386 KRT38O76015 456 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 ITGB5P18084 799 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 EIF2AK2P19525 551 aaKnown RBP15.05■□□□□ -0
VPS9D1-201ENST00000389386 PRKCHP24723 683 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 RPS12P25398 132 aaKnown RBP15.05■□□□□ -0
VPS9D1-201ENST00000389386 ESRRGP62508 458 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 PIGGQ5H8A4 983 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 EGFLAMQ63HQ2 1017 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 TMEM214Q6NUQ4 689 aaKnown RBP15.05■□□□□ -0
VPS9D1-201ENST00000389386 TRIM72Q6ZMU5 477 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 LYSMD3Q7Z3D4 306 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 ABRAQ8N0Z2 381 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 BHLHE22Q8NFJ8 381 aaPredicted RBP15.05■□□□□ -0
VPS9D1-201ENST00000389386 SORT1Q99523 831 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 OSBPL11Q9BXB4 747 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 GBA3Q9H227 469 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 CLK4Q9HAZ1 481 aaKnown RBP15.05■□□□□ -0
VPS9D1-201ENST00000389386 PLAC1Q9HBJ0 212 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 MAN1C1Q9NR34 630 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 GIN1Q9NXP7 522 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 DDX56Q9NY93 547 aaKnown RBP15.05■□□□□ -0
VPS9D1-201ENST00000389386 BCAP29Q9UHQ4 241 aa15.05■□□□□ -0
VPS9D1-201ENST00000389386 MRPL11Q9Y3B7 192 aaKnown RBP15.05■□□□□ -0
VPS9D1-201ENST00000389386 TRIM64CA6NLI5 447 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 AIM2O14862 343 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 ASNSP08243 561 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 CD1EP15812 388 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 NRLP54845 237 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 RPL10AP62906 217 aaKnown RBP15.04■□□□□ -0
VPS9D1-201ENST00000389386 GTF2BQ00403 316 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 METTL21CQ5VZV1 264 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 HAUS6Q7Z4H7 955 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 LENG8Q96PV6 779 aaPredicted RBP15.04■□□□□ -0
VPS9D1-201ENST00000389386 FRMD8P1Q9BZ68 369 aaPredicted RBP15.04■□□□□ -0
VPS9D1-201ENST00000389386 TPK1Q9H3S4 243 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 COQ10BQ9H8M1 238 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 PALMDQ9NP74 551 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 PGAP2Q9UHJ9 254 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 VPS28Q9UK41 221 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 SLC8A2Q9UPR5 921 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 CST8O60676 142 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 ESRRBO95718 433 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 GABRB2P47870 512 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 BMXP51813 675 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 SNRPFP62306 86 aaKnown RBP15.04■□□□□ -0
VPS9D1-201ENST00000389386 OGDHQ02218 1023 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 PRKG1Q13976 671 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 PDE1CQ14123 709 aaPredicted RBP15.04■□□□□ -0
VPS9D1-201ENST00000389386 IKBKEQ14164 716 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 FSCBQ5H9T9 825 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 C9orf131Q5VYM1 1079 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 FIBCD1Q8N539 461 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 DLG3Q92796 817 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 WNK4Q96J92 1243 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 KLHL32Q96NJ5 620 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 TMEM79Q9BSE2 394 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 HGH1Q9BTY7 390 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 DEFB129Q9H1M3 183 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 GPRC5CQ9NQ84 441 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 ANLNQ9NQW6 1124 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 NCKIPSDQ9NZQ3 722 aa15.04■□□□□ -0
VPS9D1-201ENST00000389386 TRDMT1O14717 391 aaKnown RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 SBF1O95248 1867 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 CYP2C9P11712 490 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 POLR2AP24928 1970 aaKnown RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 ARRB2P32121 409 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 NUDT2P50583 147 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 PEX3P56589 373 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 CBLBQ13191 982 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 CEACAM7Q14002 265 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 GPR162Q16538 588 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 MOGQ16653 247 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 NBPF12Q5TAG4 269 aaPredicted RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 MROH9Q5TGP6 573 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 KRT80Q6KB66 452 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 BNC2Q6ZN30 1099 aaPredicted RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 TMC2Q8TDI7 906 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 LXNQ9BS40 222 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 RPF2Q9H7B2 306 aaKnown RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 SCHIP1Q9P0W5 487 aaPredicted RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 EMCNQ9ULC0 261 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 NOP56O00567 594 aaKnown RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 NDUFB5O43674 189 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 CLASP2O75122 1294 aaKnown RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 CSH1P0DML2 217 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 CSH2P0DML3 217 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 PABPC1P11940 636 aaKnown RBP15.03■□□□□ -0
VPS9D1-201ENST00000389386 CCDC130P13994 396 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 CD247P20963 164 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 KCNA4P22459 653 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 DPYSQ14117 519 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 KCNJ11Q14654 390 aa15.03■□□□□ -0
VPS9D1-201ENST00000389386 TMEM132AQ24JP5 1023 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms