RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 ALDH8A1Q9H2A2 487 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 AVENQ9NQS1 362 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 LIMD1Q9UGP4 676 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 TMX2Q9Y320 296 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 HS6ST1O60243 411 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 NTRK1P04629 796 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 VCLP18206 1134 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 TUBP50607 506 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 TROAPQ12815 778 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 NOL9Q5SY16 702 aaKnown RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 ZNF57Q68EA5 555 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 APOBEC3HQ6NTF7 200 aaKnown RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 SV2AQ7L0J3 742 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 PALB2Q86YC2 1186 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 UBASH3BQ8TF42 649 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 RNF145Q96MT1 663 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 UBXN6Q9BZV1 441 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 RIBC2Q9H4K1 309 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 ATP13A1Q9HD20 1204 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 CNOT3O75175 753 aaKnown RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 INSRRP14616 1297 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 ARF5P84085 180 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-202ENST00000382381 CNGA2Q16280 664 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 MARC1Q5VT66 337 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 ERGIC2Q96RQ1 377 aa13.18□□□□□ -0.3
ABCA3-202ENST00000382381 IRF6O14896 467 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 TRIM13O60858 407 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 PEX5P50542 639 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 BEX3Q00994 111 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 ZNF470Q6ECI4 717 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 CYP4X1Q8N118 509 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 MYOCQ99972 504 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 CHURC1-FNTBB4DL54 471 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 EIF2S1P05198 315 aaKnown RBP13.17□□□□□ -0.3
ABCA3-202ENST00000382381 TSPAN8P19075 237 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 DGCR6Q14129 220 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 RIBC1Q8N443 379 aaPredicted RBP13.17□□□□□ -0.3
ABCA3-202ENST00000382381 GRIN3AQ8TCU5 1115 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 CAMKK2Q96RR4 588 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 LYVE1Q9Y5Y7 322 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 TISP43B9A030 160 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 H3BRB1 525 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 H7C4K7 107 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 BFSP2Q13515 415 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 OVOS1Q6IE37 1185 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 ZNF621Q6ZSS3 439 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 RNASE11Q8TAA1 199 aaKnown RBP13.17□□□□□ -0.3
ABCA3-202ENST00000382381 BTBD9Q96Q07 612 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 TUT1Q9H6E5 874 aaKnown RBP13.17□□□□□ -0.3
ABCA3-202ENST00000382381 XPNPEP3Q9NQH7 507 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 SEPT3Q9UH03 358 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 NAALADL1Q9UQQ1 740 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 TRDMT1O14717 391 aaKnown RBP13.17□□□□□ -0.3
ABCA3-202ENST00000382381 PKNOX1P55347 436 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 SGCGQ13326 291 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 AADACL2Q6P093 401 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 SPATA20Q8TB22 786 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 HMX1Q9NP08 348 aaPredicted RBP13.17□□□□□ -0.3
ABCA3-202ENST00000382381 ARHGEF28Q8N1W1 1705 aaKnown RBP13.17□□□□□ -0.3
ABCA3-202ENST00000382381 KIAA1210Q9ULL0 1709 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 TM4SF1P30408 202 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 SHMT1P34896 483 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 NAMPTP43490 491 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 COX10Q12887 443 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 FBXO47Q5MNV8 452 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 FOXR1Q6PIV2 292 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 C16orf62Q7Z3J2 963 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 CYP4Z1Q86W10 505 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 MAGEB18Q96M61 343 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 SERHL2Q9H4I8 314 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 SERHLQ9NQF3 203 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 TLR8Q9NR97 1041 aaKnown RBP13.17□□□□□ -0.3
ABCA3-202ENST00000382381 NCKIPSDQ9NZQ3 722 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
ABCA3-202ENST00000382381 PHGDHO43175 533 aaKnown RBP13.16□□□□□ -0.3
ABCA3-202ENST00000382381 HLA-DQA2P01906 255 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 TIGD7Q6NT04 549 aaPredicted RBP13.16□□□□□ -0.3
ABCA3-202ENST00000382381 RGMBQ6NW40 437 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 STK32CQ86UX6 486 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
ABCA3-202ENST00000382381 PPP1R2P1Q96PQ5 205 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 CGRRF1Q99675 332 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 ATXN2Q99700 1313 aaKnown RBP13.16□□□□□ -0.3
ABCA3-202ENST00000382381 A0A1B0GW55 424 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 MAGEA13PA6NCF6 341 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 VIL1P09327 827 aaKnown RBP13.16□□□□□ -0.3
ABCA3-202ENST00000382381 DUX4L2P0CJ85 424 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 DUX4L3P0CJ86 424 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 DUX4L4P0CJ87 422 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 DUX4L5P0CJ88 424 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 DUX4L6P0CJ89 424 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 DUX4L7P0CJ90 424 aa13.16□□□□□ -0.3
ABCA3-202ENST00000382381 SLC1A6P48664 564 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms