RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 RCN3Q96D15 328 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 THAP11Q96EK4 314 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 WDR64B1ANS9 1081 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 RALBP11234 206 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 ZNF12P17014 697 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 CD247P20963 164 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 IKBKEQ14164 716 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 SLC2A7Q6PXP3 512 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 TTLL6Q8N841 843 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 TBC1D15Q8TC07 691 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 MPHOSPH6Q99547 160 aaKnown RBP15.38■□□□□ 0.05
CTNS-202ENST00000381870 SLC29A1Q99808 456 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 FAM96AQ9H5X1 160 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 CNOT11Q9UKZ1 510 aaKnown RBP15.38■□□□□ 0.05
CTNS-202ENST00000381870 TSC22D4Q9Y3Q8 395 aa15.38■□□□□ 0.05
CTNS-202ENST00000381870 RIMBP2O15034 1052 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 SPTLC1O15269 473 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 KCNN4O15554 427 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 MAP3K6O95382 1288 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 BMP10O95393 424 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 UGT1A6P19224 532 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 UGT1A1P22309 533 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 UGT1A4P22310 534 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 UGT1A3P35503 534 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 UGT1A5P35504 534 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 HARS2P49590 506 aaKnown RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 NLRP11P59045 1033 aaKnown RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 TUBA4AP68366 448 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 HADHQ16836 314 aaKnown RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 PPM1JQ5JR12 505 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 GPAT2Q6NUI2 795 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 C16orf87Q6PH81 154 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 TIFABQ6ZNK6 161 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 TRPC4APQ8TEL6 797 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 ATP2A3Q93084 1043 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 VPS45Q9NRW7 570 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 PNPLA3Q9NST1 481 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 ZNF358Q9NW07 568 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 ITGB1BP2Q9UKP3 347 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 CNTN6Q9UQ52 1028 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 ZNF541Q9H0D2 1346 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 SOBPA7XYQ1 873 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 J3QRK9 145 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 GLRA3O75311 464 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 BCAS2O75934 225 aaPredicted RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 GRK2P25098 689 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 EIF2B2P49770 351 aaKnown RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 RWDD4Q6NW29 188 aaKnown RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 PPP1R2P3Q6NXS1 205 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 AMIGO3Q86WK7 504 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 LRTOMTQ8WZ04 291 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 FBXL8Q96CD0 374 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 ACO2Q99798 780 aaKnown RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 FERMT1Q9BQL6 677 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 HIPK3Q9H422 1215 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 WDR55Q9H6Y2 383 aaPredicted RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 CLK4Q9HAZ1 481 aaKnown RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 RBAKQ9NYW8 714 aaPredicted RBP15.37■□□□□ 0.05
CTNS-202ENST00000381870 TMEM216Q9P0N5 145 aa15.37■□□□□ 0.05
CTNS-202ENST00000381870 COL5A3P25940 1745 aaPredicted RBP15.36■□□□□ 0.05
CTNS-202ENST00000381870 A0A1W2PPW3 197 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 PIK3R2O00459 728 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 NEMP1O14524 444 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 ACOT8O14734 319 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 CDH3P22223 829 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 ME2P23368 584 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 GLDCP23378 1020 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 SERPINB9P50453 376 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 RAB15P59190 212 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 ITGA7Q13683 1181 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 NOMO1Q15155 1222 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 BCL2A1Q16548 175 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 ZBED5Q49AG3 693 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 STXBP5Q5T5C0 1151 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 WDR78Q5VTH9 848 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 SLC9A4Q6AI14 798 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 APOBEC3HQ6NTF7 200 aaKnown RBP15.36■□□□□ 0.05
CTNS-202ENST00000381870 IL31RAQ8NI17 732 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 DLG3Q92796 817 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 OSBPL11Q9BXB4 747 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 CDH19Q9H159 772 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 ARHGAP28Q9P2N2 729 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 COPG2Q9UBF2 871 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 PPP1R1BQ9UD71 204 aaPredicted RBP15.36■□□□□ 0.05
CTNS-202ENST00000381870 PCDHAC2Q9Y5I4 1007 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 RGSL1A5PLK6 1076 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 OXSR1O95747 527 aaPredicted RBP15.36■□□□□ 0.05
CTNS-202ENST00000381870 INHBBP09529 407 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 KRT3P12035 628 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 NFKBIAP25963 317 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 TCF7P36402 384 aaPredicted RBP15.36■□□□□ 0.05
CTNS-202ENST00000381870 CLDN10P78369 228 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 PRAMEP78395 509 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 TAP1Q03518 808 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 FAM196AQ6ZSG2 479 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 LYSMD3Q7Z3D4 306 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 FAM47BQ8NA70 645 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 TMEM35BQ8NCS4 154 aa15.36■□□□□ 0.05
CTNS-202ENST00000381870 SIGLEC10Q96LC7 697 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms