RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PRDM12Q9H4Q4 367 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 KIF9Q9HAQ2 790 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 INPP5FQ9Y2H2 1132 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 SNRPAP09012 282 aaKnown RBP23.8■■□□□ 1.4
VPS16-201ENST00000380443 CKBP12277 381 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 ALADP13716 330 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 ERCC2P18074 760 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 BDNFP23560 247 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 FOXN2P32314 431 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 SERPINB9P50453 376 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 ZNF33AQ06730 810 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 BSPRYQ5W0U4 402 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 URGCPQ8TCY9 931 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 LRRC8CQ8TDW0 803 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 SEZ6LQ9BYH1 1024 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 PRKAG3Q9UGI9 489 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 MFHAS1Q9Y4C4 1052 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 SDR42E2A6NKP2 422 aa23.79■■□□□ 1.4
VPS16-201ENST00000380443 NAB1Q13506 487 aa23.79■■□□□ 1.4
VPS16-201ENST00000380443 STEAP4Q687X5 459 aa23.79■■□□□ 1.4
VPS16-201ENST00000380443 CCNYQ8ND76 341 aa23.79■■□□□ 1.4
VPS16-201ENST00000380443 VAT1Q99536 393 aa23.79■■□□□ 1.4
VPS16-201ENST00000380443 FTHL17Q9BXU8 183 aa23.79■■□□□ 1.4
VPS16-201ENST00000380443 CCDC85CA6NKD9 419 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 FAM159BA6NKW6 160 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 KRT38O76015 456 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 CNTFP26441 200 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 PPIDQ08752 370 aaKnown RBP23.78■■□□□ 1.4
VPS16-201ENST00000380443 RNF43Q68DV7 783 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 ZNF449Q6P9G9 518 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 LVRNQ6Q4G3 990 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 UNC5AQ6ZN44 842 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 DENND5BQ6ZUT9 1274 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 SPATA2LQ8IUW3 424 aaPredicted RBP23.78■■□□□ 1.4
VPS16-201ENST00000380443 SLC43A3Q8NBI5 491 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 ABCC13Q9NSE7 274 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 HAUS2Q9NVX0 235 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 KLHL14Q9P2G3 628 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 TRHDEQ9UKU6 1024 aa23.78■■□□□ 1.4
VPS16-201ENST00000380443 I3L4J1 428 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 YWHAHQ04917 246 aaPredicted RBP23.77■■□□□ 1.4
VPS16-201ENST00000380443 DSC1Q08554 894 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 FAAP100Q0VG06 881 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 WASHC5Q12768 1159 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 IFRD2Q12894 506 aaPredicted RBP23.77■■□□□ 1.4
VPS16-201ENST00000380443 SLC1A5Q15758 541 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 BRMS1LQ5PSV4 323 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 STAMBPL1Q96FJ0 436 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 APOPT1Q96IL0 206 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 TMEM106CQ9BVX2 250 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 CAPN7Q9Y6W3 813 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 ERI2A8K979 691 aaKnown RBP23.77■■□□□ 1.4
VPS16-201ENST00000380443 MTM1Q13496 603 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 SYCP2LQ5T4T6 812 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 CTAGE3PQ8IX95 158 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 DCP1BQ8IZD4 617 aaKnown RBP23.77■■□□□ 1.4
VPS16-201ENST00000380443 PPM1NQ8N819 430 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 OR10T2Q8NGX3 314 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 TTC17Q96AE7 1141 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 HDAC11Q96DB2 347 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 TMPRSS4Q9NRS4 437 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 TMLHEQ9NVH6 421 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 MKS1Q9NXB0 559 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 MAD1L1Q9Y6D9 718 aa23.77■■□□□ 1.4
VPS16-201ENST00000380443 ALDH1A2O94788 518 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 IGLV3-25P01717 112 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 COG7P83436 770 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 DNAJC3Q13217 504 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 SH2D5Q6ZV89 423 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 ZNF567Q8N184 647 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 HAPLN3Q96S86 360 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 TKTL2Q9H0I9 626 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 HMX1Q9NP08 348 aaPredicted RBP23.76■■□□□ 1.39
VPS16-201ENST00000380443 MOCS1Q9NZB8 636 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 OR12D3Q9UGF7 316 aa23.76■■□□□ 1.39
VPS16-201ENST00000380443 FAM72CH0Y354 149 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 H0YHG0 523 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 LPXNO60711 386 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 GALNT2Q10471 571 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 EIF4EBP2Q13542 120 aaPredicted RBP23.75■■□□□ 1.39
VPS16-201ENST00000380443 NOMO2Q5JPE7 1267 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 FAM72AQ5TYM5 149 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 ITPRIPL1Q6GPH6 555 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 FAM72DQ6L9T8 149 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 TRAF7Q6Q0C0 670 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 PRPF39Q86UA1 669 aaKnown RBP23.75■■□□□ 1.39
VPS16-201ENST00000380443 LRRTM3Q86VH5 581 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 CHSY1Q86X52 802 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 FAM72BQ86X60 149 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 ADAM32Q8TC27 787 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 TCP10LQ8TDR4 215 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 DQX1Q8TE96 717 aaKnown RBP23.75■■□□□ 1.39
VPS16-201ENST00000380443 LRRN4Q8WUT4 740 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 PLAC1Q9HBJ0 212 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 ARHGEF38Q9NXL2 777 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 AP3B1O00203 1094 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 EDF1O60869 148 aaKnown RBP23.75■■□□□ 1.39
VPS16-201ENST00000380443 DNAJC8O75937 253 aaPredicted RBP23.75■■□□□ 1.39
VPS16-201ENST00000380443 OAZ2O95190 189 aa23.75■■□□□ 1.39
VPS16-201ENST00000380443 MYCP01106 439 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms