RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 TPSAB1Q15661 275 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 INTS6LQ5JSJ4 861 aaKnown RBP15.3■□□□□ 0.04
PRNP-201ENST00000379440 TRMT10BQ6PF06 316 aaKnown RBP15.3■□□□□ 0.04
PRNP-201ENST00000379440 BZW1Q7L1Q6 419 aaKnown RBP15.3■□□□□ 0.04
PRNP-201ENST00000379440 METTL23Q86XA0 190 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 PDCD7Q8N8D1 485 aaKnown RBP15.3■□□□□ 0.04
PRNP-201ENST00000379440 UGT1A7Q9HAW7 530 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 UGT1A10Q9HAW8 530 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 UGT1A8Q9HAW9 530 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 CSNK1G1Q9HCP0 422 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 FBXW11Q9UKB1 542 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 MYO18AQ92614 2054 aaKnown RBP15.3■□□□□ 0.04
PRNP-201ENST00000379440 IQANK1A0A1B0GTG1 560 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 C9IYK1 514 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 DCLK1O15075 740 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 SUN1O94901 812 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 PAFAH1B3Q15102 231 aaKnown RBP15.3■□□□□ 0.04
PRNP-201ENST00000379440 RSPH1Q8WYR4 309 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 PGBD4Q96DM1 585 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 COLEC11Q9BWP8 271 aa15.3■□□□□ 0.04
PRNP-201ENST00000379440 KCNK1O00180 336 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 B4GALT3O60512 393 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 RPLP2P05387 115 aaKnown RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 CRADDP78560 199 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 WASHC5Q12768 1159 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 PDK4Q16654 411 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 FAM133BQ5BKY9 247 aaKnown RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 RTN4RL1Q86UN2 441 aaPredicted RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 ECHDC2Q86YB7 292 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 PCSK9Q8NBP7 692 aaKnown RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 SCAMP5Q8TAC9 235 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 SLC9A7Q96T83 725 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 EBNA1BP2Q99848 306 aaKnown RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 SSU72Q9NP77 194 aaKnown RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 PRKAG3Q9UGI9 489 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 PHTF1Q9UMS5 762 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 HGSO14964 777 aaPredicted RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 ZWINTO95229 277 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 APOEP02649 317 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 IMPDH2P12268 514 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 CST5P28325 142 aaPredicted RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 ACLYP53396 1101 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 SP3Q02447 781 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 IFRD2Q12894 506 aaPredicted RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 SEMA3BQ13214 749 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 PDK1Q15118 436 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 BSPRYQ5W0U4 402 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 OVOS1Q6IE37 1185 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 SLC26A11Q86WA9 606 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 LRRC6Q86X45 466 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 ZNF567Q8N184 647 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 NTAN1Q96AB6 310 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 PKMYT1Q99640 499 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 TRPV6Q9H1D0 765 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 RMI1Q9H9A7 625 aa15.29■□□□□ 0.04
PRNP-201ENST00000379440 ACTR5Q9H9F9 607 aaPredicted RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 ALG13Q9NP73 1137 aaKnown RBP15.29■□□□□ 0.04
PRNP-201ENST00000379440 TDRD15B5MCY1 1934 aaKnown RBP15.28■□□□□ 0.04
PRNP-201ENST00000379440 M0QZQ0 153 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 ALDH1A1P00352 501 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 CYP11A1P05108 521 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 PYGBP11216 843 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 PRKCHP24723 683 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 PSMB4P28070 264 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 GLUD2P49448 558 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 TPI1P60174 286 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 MGAT5Q09328 741 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 NAA25Q14CX7 972 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 SH2D5Q6ZV89 423 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 ZNF598Q86UK7 904 aaKnown RBP15.28■□□□□ 0.04
PRNP-201ENST00000379440 UNC5BQ8IZJ1 945 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 NPWQ8N729 165 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 CCDC63Q8NA47 563 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 DEPDC1BQ8WUY9 529 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 LRRC39Q96DD0 335 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 RMDN2Q96LZ7 410 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 TKTL2Q9H0I9 626 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 WDCPQ9H6R7 721 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 ARL2BPQ9Y2Y0 163 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 CSH1P0DML2 217 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 CSH2P0DML3 217 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 PEX19P40855 299 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 SCAPQ12770 1279 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 OLIG2Q13516 323 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 SEPT7Q16181 437 aaKnown RBP15.28■□□□□ 0.04
PRNP-201ENST00000379440 TAC4Q86UU9 113 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 ZNF280BQ86YH2 543 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 LRRC8CQ8TDW0 803 aa15.28■□□□□ 0.04
PRNP-201ENST00000379440 PGAP3Q96FM1 320 aaPredicted RBP15.28■□□□□ 0.04
PRNP-201ENST00000379440 WDR27A2RRH5 827 aa15.27■□□□□ 0.04
PRNP-201ENST00000379440 TRIM49D1C9J1S8 452 aa15.27■□□□□ 0.04
PRNP-201ENST00000379440 TRDMT1O14717 391 aaKnown RBP15.27■□□□□ 0.04
PRNP-201ENST00000379440 LPXNO60711 386 aa15.27■□□□□ 0.04
PRNP-201ENST00000379440 OR4Q2P0C623 313 aa15.27■□□□□ 0.04
PRNP-201ENST00000379440 FDFT1P37268 417 aa15.27■□□□□ 0.04
PRNP-201ENST00000379440 SESN2P58004 480 aaPredicted RBP15.27■□□□□ 0.04
PRNP-201ENST00000379440 FAM26DQ5JW98 314 aa15.27■□□□□ 0.04
PRNP-201ENST00000379440 PM20D1Q6GTS8 502 aa15.27■□□□□ 0.04
PRNP-201ENST00000379440 ZNF75CPQ92670 426 aaPredicted RBP15.27■□□□□ 0.04
PRNP-201ENST00000379440 XAB2Q9HCS7 855 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms