RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ERMARDQ5T6L9 678 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 EXOC3L1Q86VI1 746 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 FNDC5Q8NAU1 212 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 GPRC5DQ9NZD1 345 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 KCNQ3O43525 872 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 HTR1BP28222 390 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 MEA1Q16626 185 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 BNIPLQ7Z465 357 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 TTLL2Q9BWV7 592 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 PRAMEF22A3QJZ6 481 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 AP1S1P61966 158 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 ACE2Q9BYF1 805 aaPredicted RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 VHLP40337 213 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 HK2P52789 917 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 RHOAP61586 193 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 ANGEL2Q5VTE6 544 aaKnown RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 MSANTD1Q6ZTZ1 278 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 BATF3Q9NR55 127 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 LYVE1Q9Y5Y7 322 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 PKP1Q13835 747 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 LONRF1Q17RB8 773 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 MNTQ99583 582 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 TMEM39AQ9NV64 488 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 ELOVL2Q9NXB9 296 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 TBX3O15119 743 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 GCATO75600 419 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 S100A1P23297 94 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 GSPT2Q8IYD1 628 aaKnown RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 TRIM66O15016 1216 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 H2AFXP16104 143 aaPredicted RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 TFE3P19532 575 aaPredicted RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 RPL3P39023 403 aaKnown RBP11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 MAGEA4P43358 317 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 SMCO3A2RU48 225 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 PDE5AO76074 875 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 GPD2P43304 727 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 MMP14P50281 582 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 FGD3Q5JSP0 725 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 TDRPQ86YL5 185 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 SUSD6Q92537 303 aa11.47□□□□□ -0.57
PTCHD1-201ENST00000379361 BCL10O95999 233 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 SP8Q8IXZ3 490 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 MTA3Q9BTC8 594 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 SLC12A8A0AV02 714 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 MAGEB16A2A368 324 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 GTF2H1P32780 548 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 ADGRG2Q8IZP9 1017 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 SLC38A2Q96QD8 506 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 NME5P56597 212 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 RAB25P57735 213 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 NT5DC3Q86UY8 548 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 OMA1Q96E52 524 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 TUBE1Q9UJT0 475 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 GSTK1Q9Y2Q3 226 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 RFX7Q2KHR2 1363 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 GATBO75879 557 aaKnown RBP11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 SCGNO76038 276 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 AMIGO1Q86WK6 493 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 CENPSQ8N2Z9 138 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 GPRASP2Q96D09 838 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 TRAV19A0A0A6YYK7 116 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 CCDC162PA2VCL2 907 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 ZNF208O43345 1280 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 OR2L5Q8NG80 312 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 CENPIQ92674 756 aaPredicted RBP11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 RASSF1Q9NS23 344 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 DNAJC11Q9NVH1 559 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 SKIV2L2P42285 1042 aaKnown RBP11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 INTS11Q5TA45 600 aaKnown RBP11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 RASSF6Q6ZTQ3 369 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 ITCHQ96J02 903 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 TMEM138Q9NPI0 162 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 DCP1AQ9NPI6 582 aaPredicted RBP11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 KIAA1257Q9ULG3 409 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 SPEF1Q9Y4P9 236 aa11.46□□□□□ -0.57
PTCHD1-201ENST00000379361 HLA-DRAP01903 254 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 SLC2A4P14672 509 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 YY1P25490 414 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 UGT1A5P35504 534 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 DLG1Q12959 904 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 GRB14Q14449 540 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 USP45Q70EL2 814 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 PIGBQ92521 554 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 FIG4Q92562 907 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 GAL3ST3Q96A11 431 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 TRIM49D1C9J1S8 452 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 ZBTB14O43829 449 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 ITGB3P05106 788 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 THP07101 528 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 KLHL35Q6PF15 583 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 DOK6Q6PKX4 331 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 PI16Q6UXB8 463 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 ZBTB49Q6ZSB9 765 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 DAW1Q8N136 415 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 CDADC1Q9BWV3 514 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 FAM196BA6NMK8 535 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 ACADSP16219 412 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 RPL4P36578 427 aaKnown RBP11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 IQCF2Q8IXL9 164 aa11.46□□□□□ -0.58
PTCHD1-201ENST00000379361 ANKDD1BA6NHY2 528 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms