RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 C2orf81A6NN90 581 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF263O14978 683 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 TM9SF1O15321 606 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 SNAP91O60641 907 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 KRT1P04264 644 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 HTR2BP41595 481 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 SYTL1Q8IYJ3 562 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 Q8N9G6 341 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-202ENST00000378161 TDRD5Q8NAT2 981 aaKnown RBP12.05□□□□□ -0.48
NPHP4-202ENST00000378161 POMGNT1Q8WZA1 660 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 LPIN3Q9BQK8 851 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 MAN1C1Q9NR34 630 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 TLL2Q9Y6L7 1015 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 ZMYM2Q9UBW7 1377 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 A0A088AWK7 358 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 APOA4P06727 396 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 TCN1P20061 433 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-202ENST00000378161 ADRA1DP25100 572 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 RPA3P35244 121 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-202ENST00000378161 SEPHS1P49903 392 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 NUDT2P50583 147 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 HNRNPDQ14103 355 aaKnown RBP12.05□□□□□ -0.48
NPHP4-202ENST00000378161 DRAP1Q14919 205 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-202ENST00000378161 MAPRE2Q15555 327 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 SLCO6A1Q86UG4 719 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 DTX3Q8N9I9 347 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 OR7A2PQ8NGA2 310 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 NMUR2Q9GZQ4 415 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 NARFQ9UHQ1 456 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 BAIAP2Q9UQB8 552 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 SLC30A1Q9Y6M5 507 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 WDR47O94967 919 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF806P0C7X5 589 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 PCNAP12004 261 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 UCHL3P15374 230 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 LIG4P49917 911 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 VBP1P61758 197 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 TLR1Q15399 786 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 FKBP9P1Q75LS8 142 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 APTXQ7Z2E3 356 aaKnown RBP12.05□□□□□ -0.48
NPHP4-202ENST00000378161 OSTM1Q86WC4 334 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 GLYCTKQ8IVS8 523 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF420Q8TAQ5 688 aaPredicted RBP12.05□□□□□ -0.48
NPHP4-202ENST00000378161 TM9SF2Q99805 663 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 FANCEQ9HB96 536 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 DCAF16Q9NXF7 216 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 MEGF6O75095 1541 aa12.05□□□□□ -0.48
NPHP4-202ENST00000378161 TRIM24O15164 1050 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 RFX1P22670 979 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 BMXP51813 675 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 PDIA2Q13087 525 aaKnown RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 HADHQ16836 314 aaKnown RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 SLC15A4Q8N697 577 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 METTL2AQ96IZ6 378 aaKnown RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 FAM111AQ96PZ2 611 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF347Q96SE7 839 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 TUBA1CQ9BQE3 449 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 CLEC4MQ9H2X3 399 aaPredicted RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 MRPL47Q9HD33 250 aaKnown RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 AURKCQ9UQB9 309 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 B3GNT3Q9Y2A9 372 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 KCNE2Q9Y6J6 123 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ESYT2A0FGR8 921 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 CCNT2O60583 730 aaKnown RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 RPS6KA4O75676 772 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ALDH2P05091 517 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 MAGP20916 626 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 BGNP21810 368 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 PRKAA2P54646 552 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 CEP170P1Q96L14 293 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ZFYVE28Q9HCC9 887 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ADPRHL2Q9NX46 363 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ING3Q9NXR8 418 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 PCDH10Q9P2E7 1040 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 SORCS3Q9UPU3 1222 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 AURKAO14965 403 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 OR5F1O95221 314 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 MTMR2Q13614 643 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 PLA2G4EQ3MJ16 856 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 CDONQ4KMG0 1287 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 CENPPQ6IPU0 288 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 PGM2L1Q6PCE3 622 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 FBXO33Q7Z6M2 555 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 SHCBP1Q8NEM2 672 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 OR5H6Q8NGV6 325 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 DCAF4Q8WV16 495 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ASIC4Q96FT7 647 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 VPS11Q9H270 941 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 TMEM9Q9P0T7 183 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 MYOCOSA0A1B0GUC4 107 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 SIGLEC16A6NMB1 481 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 HNRNPDLO14979 420 aaKnown RBP12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ANGPT2O15123 496 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 ALOX15BO15296 676 aa12.04□□□□□ -0.48
NPHP4-202ENST00000378161 DENRO43583 198 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms