RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 CAPRIN2Q6IMN6 1127 aaKnown RBP11.24□□□□□ -0.61
BEST1-201ENST00000378043 LRRC74BQ6ZQY2 392 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 MAVSQ7Z434 540 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 GPRC5AQ8NFJ5 357 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 SHKBP1Q8TBC3 707 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 ACMSDQ8TDX5 336 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 RNF139Q8WU17 664 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 SCG3Q8WXD2 468 aaKnown RBP11.24□□□□□ -0.61
BEST1-201ENST00000378043 NT5C3BQ969T7 300 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 HSFY1Q96LI6 401 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 SYBUQ9NX95 663 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 GDAP2Q9NXN4 497 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 ITGA2BP08514 1039 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 LINGO3P0C6S8 592 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 CPOXP36551 454 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 ACADSBP45954 432 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 SULT1E1P49888 294 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 TUBP50607 506 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 AP1B1Q10567 949 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 HIC1Q14526 733 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 MUM1Q2TAK8 710 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 DCAF6Q58WW2 860 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 RABGAP1LQ5R372 815 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 BSPRYQ5W0U4 402 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 NOTUMQ6P988 496 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 CES3Q6UWW8 571 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 HACE1Q8IYU2 909 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 ZNF567Q8N184 647 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 RNF169Q8NCN4 708 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 PIWIL2Q8TC59 973 aaKnown RBP11.24□□□□□ -0.61
BEST1-201ENST00000378043 TMEM40Q8WWA1 233 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 FAM149B1Q96BN6 582 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 RILPQ96NA2 401 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 PANX3Q96QZ0 392 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 PRDM12Q9H4Q4 367 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 EIF2B3Q9NR50 452 aaKnown RBP11.24□□□□□ -0.61
BEST1-201ENST00000378043 KRT82Q9NSB4 513 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 ZFATQ9P243 1243 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 RCOR3Q9P2K3 495 aaPredicted RBP11.24□□□□□ -0.61
BEST1-201ENST00000378043 SLC7A8Q9UHI5 535 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 UBQLN1Q9UMX0 589 aaKnown RBP11.24□□□□□ -0.61
BEST1-201ENST00000378043 DPPA5A6NC42 116 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 I6L893 689 aaPredicted RBP11.23□□□□□ -0.61
BEST1-201ENST00000378043 OPHN1O60890 802 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 TM7SF2O76062 418 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 AMHP03971 560 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 ERVK-10P10266 1014 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 PGAM1P18669 254 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 IGFBP6P24592 240 aaPredicted RBP11.23□□□□□ -0.61
BEST1-201ENST00000378043 MLH1P40692 756 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 GLUD2P49448 558 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 NDUFV1P49821 464 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 TSNAXIP1Q2TAA8 658 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 DUSP28Q4G0W2 176 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 EFHC1Q5JVL4 640 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 SYPL2Q5VXT5 272 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 PAQR9Q6ZVX9 377 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 OSTM1Q86WC4 334 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 SCUBE1Q8IWY4 988 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 KBTBD2Q8IY47 623 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 ULK2Q8IYT8 1036 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 FCRL3Q96P31 734 aaPredicted RBP11.23□□□□□ -0.61
BEST1-201ENST00000378043 NPY6RQ99463 290 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 SORT1Q99523 831 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 GORASP1Q9BQQ3 440 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 DNAJC16Q9Y2G8 782 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 SHROOM3Q8TF72 1996 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 SYNJ2BP-COX16A0A087WUM0 186 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 CLDN5O00501 218 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 XPO1O14980 1071 aaKnown RBP11.23□□□□□ -0.61
BEST1-201ENST00000378043 GLRA3O75311 464 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 PROCP04070 461 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 DARSP14868 501 aaKnown RBP11.23□□□□□ -0.61
BEST1-201ENST00000378043 AOC1P19801 751 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 SLC1A6P48664 564 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 ERFP50548 548 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 GTF2A2P52657 109 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 DBN1Q16643 649 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 C10orf107Q8IVU9 208 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 UCMAQ8WVF2 138 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 THTPAQ9BU02 230 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 SNX25Q9H3E2 840 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 ANLNQ9NQW6 1124 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 ZNF358Q9NW07 568 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 TMEM216Q9P0N5 145 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 COX16Q9P0S2 106 aa11.23□□□□□ -0.61
BEST1-201ENST00000378043 F8W8V4 182 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 SPECC1L-ADORA2AF8WAN1 911 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 FAM72CH0Y354 149 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 ZNF195O14628 629 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 F7P08709 466 aaPredicted RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
BEST1-201ENST00000378043 DPYSQ14117 519 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 DGKDQ16760 1214 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 FAM72AQ5TYM5 149 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 FAM72DQ6L9T8 149 aa11.22□□□□□ -0.61
BEST1-201ENST00000378043 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms