RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 XPO1O14980 1071 aaKnown RBP20.14■□□□□ 0.81
PCDH8-202ENST00000377942 MGAT1P26572 445 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 ARL2P36404 184 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 CSHL1Q14406 222 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 ITIH4Q14624 930 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 CCDC153Q494R4 210 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 ARMC12Q5T9G4 340 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 RFX8Q6ZV50 586 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 ZCCHC9Q8N567 271 aaKnown RBP20.14■□□□□ 0.81
PCDH8-202ENST00000377942 CXorf38Q8TB03 319 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 HTATIP2Q9BUP3 242 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 SPG21Q9NZD8 308 aa20.14■□□□□ 0.81
PCDH8-202ENST00000377942 FAM208AQ9UK61 1670 aaKnown RBP20.14■□□□□ 0.81
PCDH8-202ENST00000377942 NFKBIEO00221 500 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 MSH3P20585 1137 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 GRK3P35626 688 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 ANXA11P50995 505 aaKnown RBP20.13■□□□□ 0.81
PCDH8-202ENST00000377942 TP53BP2Q13625 1128 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 C15orf59Q2T9L4 293 aaPredicted RBP20.13■□□□□ 0.81
PCDH8-202ENST00000377942 TMC3Q7Z5M5 1100 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 KCNV2Q8TDN2 545 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 KAT2BQ92831 832 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 ZNF670Q9BS34 389 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 A0A0A0MRY4 1105 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.13■□□□□ 0.81
PCDH8-202ENST00000377942 HNRNPRO43390 633 aaKnown RBP20.13■□□□□ 0.81
PCDH8-202ENST00000377942 GJB1P08034 283 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 GLRBP48167 497 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 SPATA13Q96N96 652 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 LHX5Q9H2C1 402 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 GDF3Q9NR23 364 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 SOX13Q9UN79 622 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 LOC100653049A0A140TA62 436 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 KRT34O76011 436 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 ALOX15P16050 662 aaPredicted RBP20.13■□□□□ 0.81
PCDH8-202ENST00000377942 HPCAP84074 193 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 MED21Q13503 144 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 COL9A3Q14050 684 aaPredicted RBP20.13■□□□□ 0.81
PCDH8-202ENST00000377942 C9orf57Q5W0N0 161 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 DUSP16Q9BY84 665 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 SEZ6LQ9BYH1 1024 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 CEP41Q9BYV8 373 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 ASAH2Q9NR71 780 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 TAS2R13Q9NYV9 303 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 AFDNP55196 1824 aaKnown RBP20.13■□□□□ 0.81
PCDH8-202ENST00000377942 VGLL3A8MV65 326 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 EPHB6O15197 1021 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 CHADO15335 359 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 ZC3H12AQ5D1E8 599 aaKnown RBP20.13■□□□□ 0.81
PCDH8-202ENST00000377942 PALB2Q86YC2 1186 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 C17orf80Q9BSJ5 609 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 ANKRD6Q9Y2G4 727 aa20.13■□□□□ 0.81
PCDH8-202ENST00000377942 NRXN3Q9Y4C0 1643 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 FKBP9O95302 570 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 AIF1P55008 147 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 LRRC74AQ0VAA2 488 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 FKBP9P1Q75LS8 142 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 METTL3Q86U44 580 aaKnown RBP20.12■□□□□ 0.81
PCDH8-202ENST00000377942 DEFB118Q96PH6 123 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 SYNDIG1LA6NDD5 238 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 DAB1O75553 588 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 POLR2EP19388 210 aaKnown RBP20.12■□□□□ 0.81
PCDH8-202ENST00000377942 SERPINA4P29622 427 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 MAP3K10Q02779 954 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 PSMD5Q16401 504 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 FAM162AQ96A26 154 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 RNF157Q96PX1 679 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 SNRNP25Q9BV90 132 aaKnown RBP20.12■□□□□ 0.81
PCDH8-202ENST00000377942 CCDC90BQ9GZT6 254 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 CHST7Q9NS84 486 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 WDR27A2RRH5 827 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 IFRD1O00458 451 aaPredicted RBP20.12■□□□□ 0.81
PCDH8-202ENST00000377942 AKAP10O43572 662 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 PCDH8O95206 1070 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 TPH1P17752 444 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 IRF2BP2Q7Z5L9 587 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 PSTKQ8IV42 348 aaKnown RBP20.12■□□□□ 0.81
PCDH8-202ENST00000377942 NMRAL1Q9HBL8 299 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 RNF19AQ9NV58 838 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 SKAP2O75563 359 aaPredicted RBP20.12■□□□□ 0.81
PCDH8-202ENST00000377942 SELPP16109 830 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 SPPL2BQ8TCT7 592 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 RMND5AQ9H871 391 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 EFCAB1Q9HAE3 211 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 NINJ2Q9NZG7 142 aa20.12■□□□□ 0.81
PCDH8-202ENST00000377942 HDCP19113 662 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 MATKP42679 507 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 ENPEPQ07075 957 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 ZNF555Q8NEP9 628 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 PANX3Q96QZ0 392 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 NXF3Q9H4D5 531 aaKnown RBP20.11■□□□□ 0.81
PCDH8-202ENST00000377942 HEY2Q9UBP5 337 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 HNRNPCL2B2RXH8 293 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 ZNF862O60290 1169 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 PEX19P40855 299 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 MRPS5P82675 430 aaKnown RBP20.11■□□□□ 0.81
PCDH8-202ENST00000377942 SGCGQ13326 291 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 CES5AQ6NT32 575 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 SLC24A5Q71RS6 500 aa20.11■□□□□ 0.81
PCDH8-202ENST00000377942 GLT6D1Q7Z4J2 308 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms