RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PDGFRBP09619 1106 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 C6orf222P0C671 652 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 MRPS15P82914 257 aaKnown RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 NOMO1Q15155 1222 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 GALNTL6Q49A17 601 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 ATP13A4Q4VNC1 1196 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 FNBP1LQ5T0N5 605 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 TMC7Q7Z402 723 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 IFNEQ86WN2 208 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 SHCBP1Q8NEM2 672 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 USP6NLQ92738 828 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 DCUN1D1Q96GG9 259 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 BDH2Q9BUT1 245 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 PRKD2Q9BZL6 878 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 TRPC7Q9HCX4 862 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 CDH22Q9UJ99 828 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 SQORQ9Y6N5 450 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 RNF103O00237 685 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 TOP3AQ13472 1001 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 FNIP1Q8TF40 1166 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 CPT1BQ92523 772 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 RMDN1Q96DB5 314 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 EGFL8Q99944 293 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 PAIP1Q9H074 479 aaKnown RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 DDX28Q9NUL7 540 aaKnown RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 RRN3Q9NYV6 651 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 PLK2Q9NYY3 685 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 ZC3H4Q9UPT8 1303 aaKnown RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 ECHS1P30084 290 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 GLRBP48167 497 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 CD151P48509 253 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 RAD51Q06609 339 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 NOTUMQ6P988 496 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 NPNTQ6UXI9 565 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 ACOT1Q86TX2 421 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 FAM83AQ86UY5 434 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 GSTCDQ8NEC7 633 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 SNX19Q92543 992 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 DACT3Q96B18 629 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 PRMT6Q96LA8 375 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 COMMD8Q9NX08 183 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 CLIC5Q9NZA1 410 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 TUBGCP6Q96RT7 1819 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 WTIPA6NIX2 430 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 CLOCKO15516 846 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 NDUFS3O75489 264 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 SUPT7LO94864 414 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 MMP8P22894 467 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 CDKN2BP42772 138 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 KCNT2Q6UVM3 1135 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 SLC30A10Q6XR72 485 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 EZH1Q92800 747 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-202ENST00000377865 TUBGCP3Q96CW5 907 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 DAPK2Q9UIK4 370 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 SNCAIPQ9Y6H5 919 aa8.97□□□□□ -0.97
PCDH9-202ENST00000377865 SNED1Q8TER0 1413 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 FRG1Q14331 258 aaKnown RBP8.96□□□□□ -0.97
PCDH9-202ENST00000377865 ANO7Q6IWH7 933 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 TATDN1Q6P1N9 297 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 C16orf46Q6P387 395 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 RFWD3Q6PCD5 774 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 SPOCK2Q92563 424 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 ELMO3Q96BJ8 720 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 DDX50Q9BQ39 737 aaKnown RBP8.96□□□□□ -0.97
PCDH9-202ENST00000377865 MAP3K6O95382 1288 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 PGM3O95394 542 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 PIK3R1P27986 724 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 NDST1P52848 882 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 WDR4P57081 412 aaKnown RBP8.96□□□□□ -0.97
PCDH9-202ENST00000377865 EPS8Q12929 822 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 CNPY1Q3B7I2 92 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 HORMAD1Q86X24 394 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 DHRSXQ8N5I4 330 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 VPS33AQ96AX1 596 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 CD274Q9NZQ7 290 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 RAD54BQ9Y620 910 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 USP54Q70EL1 1684 aa8.96□□□□□ -0.97
PCDH9-202ENST00000377865 CCDC78A2IDD5 438 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 SLC22A2O15244 555 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 PIGNO95427 931 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 CALCAP01258 141 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 MLNP12872 115 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 NFKBIAP25963 317 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 BNIP2Q12982 314 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 MRNIPQ6NTE8 343 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 UGT3A1Q6NUS8 523 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 CENPLQ8N0S6 344 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 CYP4X1Q8N118 509 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 CERS2Q96G23 380 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 WDCPQ9H6R7 721 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 COG4Q9H9E3 785 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 CLK4Q9HAZ1 481 aaKnown RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 PIM2Q9P1W9 311 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 SAE1Q9UBE0 346 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-202ENST00000377865 FAM198AQ9UFP1 575 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 TJP1Q07157 1748 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
PCDH9-202ENST00000377865 LDLRP01130 860 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms