RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 HOXA11P31270 313 aaPredicted RBP14.95□□□□□ -0.02
MSH5-201ENST00000375703 CPOXP36551 454 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 MATKP42679 507 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 SLC25A3Q00325 362 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 HIC1Q14526 733 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 PCLAFQ15004 111 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 GRIK4Q16099 956 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 PPM1JQ5JR12 505 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 EFHC1Q5JVL4 640 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 MARCH8Q5T0T0 291 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 C9orf57Q5W0N0 161 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 DPY19L2Q6NUT2 758 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 MAMDC4Q6UXC1 1216 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 MOB2Q70IA6 237 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 ZNF410Q86VK4 478 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 DEFB106AQ8N104 65 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 CRYBG2Q8N1P7 616 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 PGBD4Q96DM1 585 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 NAT9Q9BTE0 207 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 EIF2AQ9BY44 585 aaKnown RBP14.95□□□□□ -0.02
MSH5-201ENST00000375703 EIF2B3Q9NR50 452 aaKnown RBP14.95□□□□□ -0.02
MSH5-201ENST00000375703 PNPOQ9NVS9 261 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 MCM3APO60318 1980 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 A0A088AWK7 358 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 ENO4A6NNW6 628 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 GRK2P25098 689 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 RPL34P49207 117 aaKnown RBP14.95□□□□□ -0.02
MSH5-201ENST00000375703 SULT1E1P49888 294 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 TMEM62Q0P6H9 643 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 NAB1Q13506 487 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 NAIF1Q69YI7 327 aaPredicted RBP14.95□□□□□ -0.02
MSH5-201ENST00000375703 SLC27A1Q6PCB7 646 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 ANKRD13AQ8IZ07 590 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 SLC25A41Q8N5S1 370 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 NDRG1Q92597 394 aaKnown RBP14.95□□□□□ -0.02
MSH5-201ENST00000375703 FAM149B1Q96BN6 582 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 HSFY1Q96LI6 401 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 PPP1R12CQ9BZL4 782 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 GPAMQ9HCL2 828 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 SYBUQ9NX95 663 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 IL1RAPL1Q9NZN1 696 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 TMEM216Q9P0N5 145 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 DNAJB4Q9UDY4 337 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 MAGEA13PA6NCF6 341 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 PROCP04070 461 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 POLBP06746 335 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 ERVK-10P10266 1014 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 PSMB4P28070 264 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 MLH1P40692 756 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 IRX1P78414 480 aaPredicted RBP14.94□□□□□ -0.02
MSH5-201ENST00000375703 INSCQ1MX18 579 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 SLC25A52Q3SY17 297 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 RABGAP1LQ5R372 815 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 CES3Q6UWW8 571 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 CATSPER4Q7RTX7 472 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 RASSF3Q86WH2 238 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 NME8Q8N427 588 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 POU5F2Q8N7G0 328 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 SLC2A14Q8TDB8 520 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 SNX25Q9H3E2 840 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 NDE1Q9NXR1 346 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 RCOR3Q9P2K3 495 aaPredicted RBP14.94□□□□□ -0.02
MSH5-201ENST00000375703 BRCA1P38398 1863 aaKnown RBP14.94□□□□□ -0.02
MSH5-201ENST00000375703 TRIP11Q15643 1979 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 SCN1AP35498 2009 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 SYNJ2BP-COX16A0A087WUM0 186 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 SIN3BO75182 1162 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 SMIM24O75264 130 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 ADCYAP1R1P41586 468 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 GLUD2P49448 558 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 IDH3AP50213 366 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 DCAF6Q58WW2 860 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 RSPH3Q86UC2 560 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 KBTBD7Q8WVZ9 684 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 GATA6Q92908 595 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 PRDM16Q9HAZ2 1276 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 TMPRSS4Q9NRS4 437 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 COX16Q9P0S2 106 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 COPG2Q9UBF2 871 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 KCNH4Q9UQ05 1017 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 CREB3O43889 395 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 FKBP6O75344 327 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 PRKCGP05129 697 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 RALBP11234 206 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 IFRD2Q12894 506 aaPredicted RBP14.94□□□□□ -0.02
MSH5-201ENST00000375703 TTLL12Q14166 644 aaPredicted RBP14.94□□□□□ -0.02
MSH5-201ENST00000375703 PDK1Q15118 436 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 FBXO47Q5MNV8 452 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 TMCO4Q5TGY1 634 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 OR52E8Q6IFG1 317 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 ATG14Q6ZNE5 492 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 PID1Q7Z2X4 250 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 GSTCDQ8NEC7 633 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 RNF139Q8WU17 664 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 SORT1Q99523 831 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 PRDM12Q9H4Q4 367 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 FAM96AQ9H5X1 160 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 RGS17Q9UGC6 210 aaPredicted RBP14.94□□□□□ -0.02
MSH5-201ENST00000375703 RPS6KL1Q9Y6S9 549 aa14.94□□□□□ -0.02
MSH5-201ENST00000375703 KPNA7A9QM74 516 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms