RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 SNRNP35Q16560 246 aaKnown RBP5.56□□□□□ -1.52
SCN2A-203ENST00000375437 PPIL6Q8IXY8 311 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 ADGRF2Q8IZF7 708 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 MIER2Q8N344 545 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 SSH3Q8TE77 659 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 UTP15Q8TED0 518 aaKnown RBP5.56□□□□□ -1.52
SCN2A-203ENST00000375437 POP5Q969H6 163 aaKnown RBP5.56□□□□□ -1.52
SCN2A-203ENST00000375437 HIST1H2AAQ96QV6 131 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 MTG1Q9BT17 334 aaPredicted RBP5.56□□□□□ -1.52
SCN2A-203ENST00000375437 TMEM138Q9NPI0 162 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 VPS45Q9NRW7 570 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 GIT1Q9Y2X7 761 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 ANO9A1A5B4 782 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 MFAP3LO75121 409 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 ATG7O95352 703 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 AGTP01019 485 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 TCN1P20061 433 aaPredicted RBP5.56□□□□□ -1.52
SCN2A-203ENST00000375437 CHN2P52757 468 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 DCTN2Q13561 401 aaKnown RBP5.56□□□□□ -1.52
SCN2A-203ENST00000375437 XKR4Q5GH76 650 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 SEL1L3Q68CR1 1132 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 SPATA21Q7Z572 469 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 LDHDQ86WU2 507 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 HDDC3Q8N4P3 179 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCN2A-203ENST00000375437 CDH7Q9ULB5 785 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 KDM6BO15054 1643 aa5.56□□□□□ -1.52
SCN2A-203ENST00000375437 NPHP4O75161 1426 aaPredicted RBP5.56□□□□□ -1.52
SCN2A-203ENST00000375437 PSTPIP1O43586 416 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 RPS6KA4O75676 772 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 SKIV2L2P42285 1042 aaKnown RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 BTN3A2P78410 334 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 BDH1Q02338 343 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 KCNT1Q5JUK3 1230 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 C1orf54Q8WWF1 131 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 TCF25Q9BQ70 676 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CBWD1Q9BRT8 395 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 RSPH9Q9H1X1 276 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CYLDQ9NQC7 956 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 USP20Q9Y2K6 914 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 TRPM1Q7Z4N2 1603 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 IRGMA1A4Y4 181 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 NCF1BA6NI72 391 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 NCF1CA8MVU1 366 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CYB561D2O14569 222 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 SUPT7LO94864 414 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 THRAP10827 490 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 NCF1P14598 390 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 RPA3P35244 121 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 ITGA8P53708 1063 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 SCARF1Q14162 830 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 BTG3Q14201 252 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 GRM4Q14833 912 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 SMAD1Q15797 465 aaKnown RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 FGD3Q5JSP0 725 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CCDC36Q8IYA8 594 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 NKX2-3Q8TAU0 364 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 FAM120BQ96EK7 910 aaKnown RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 ZNF668Q96K58 619 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 ASB2Q96Q27 587 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 RRAGDQ9NQL2 400 aaPredicted RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 LMBRD1Q9NUN5 540 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 NARFQ9UHQ1 456 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 MED14O60244 1454 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 IQCMA0A1B0GVH7 501 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CCDC154A6NI56 674 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CCT8L1PA6NM43 557 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 POLRMTO00411 1230 aaKnown RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 PQBP1O60828 265 aaKnown RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 FAM20BO75063 409 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 ENTPD5O75356 428 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 TUFMP49411 452 aaKnown RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 IST1P53990 364 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CCNIQ14094 377 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 RETSATQ6NUM9 610 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 ZNF786Q8N393 782 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 RNPC3Q96LT9 517 aaKnown RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 GPER1Q99527 375 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 RUSC1Q9BVN2 902 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 YIPF3Q9GZM5 350 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 TMEM216Q9P0N5 145 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 WHRNQ9P202 907 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CHKBQ9Y259 395 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 TPRKBQ9Y3C4 175 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 PCDHGA3Q9Y5H0 932 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 SDR42E2A6NKP2 422 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 PDXKO00764 312 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 EIF3HO15372 352 aaKnown RBP eCLIP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 ASNA1O43681 348 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 GNSP15586 552 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 KCNA3P22001 575 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CLCN6P51797 869 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 NR6A1Q15406 480 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 FSCN1Q16658 493 aaKnown RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 C4orf46Q504U0 113 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 METTL21CQ5VZV1 264 aa5.55□□□□□ -1.52
SCN2A-203ENST00000375437 CXXC5Q7LFL8 322 aaKnown RBP5.55□□□□□ -1.52
SCN2A-203ENST00000375437 NECAB2Q7Z6G3 386 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms