RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 DHRS4Q9BTZ2 278 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 ACSS3Q9H6R3 686 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 CNTN3Q9P232 1028 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 SHOC2Q9UQ13 582 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 PPME1Q9Y570 386 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 SCINQ9Y6U3 715 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 EVPLQ92817 2033 aa12.49□□□□□ -0.41
C9orf3-203ENST00000375315 PROCP04070 461 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 EIF2S1P05198 315 aaKnown RBP12.48□□□□□ -0.41
C9orf3-203ENST00000375315 KITP10721 976 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 PSMC3P17980 439 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 PRDX6P30041 224 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 MXI1P50539 228 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 GPX6P59796 221 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 LAMC2Q13753 1193 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 GK3PQ14409 553 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 NFIL3Q16649 462 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 HSF5Q4G112 596 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-203ENST00000375315 EPC2Q52LR7 807 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 C6orf183Q5T699 404 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 METTL21CQ5VZV1 264 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 SPOPLQ6IQ16 392 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 TMEM214Q6NUQ4 689 aaKnown RBP12.48□□□□□ -0.41
C9orf3-203ENST00000375315 THAP11Q96EK4 314 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 NDEL1Q9GZM8 345 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 HAPLN2Q9GZV7 340 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 GBA3Q9H227 469 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 ABHD16BQ9H3Z7 469 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 CYP4F11Q9HBI6 524 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 VPS45Q9NRW7 570 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 AGO2Q9UKV8 859 aaKnown RBP12.48□□□□□ -0.41
C9orf3-203ENST00000375315 ITGA11Q9UKX5 1188 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 SGPL1O95470 568 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 ZBTB11O95625 1053 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-203ENST00000375315 BST1Q10588 318 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 HIF1AQ16665 826 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 TCHHL1Q5QJ38 904 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-203ENST00000375315 C6orf52Q5T4I8 152 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 MAP4K3Q8IVH8 894 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 ARHGEF19Q8IW93 802 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 TAS1R2Q8TE23 839 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 EPS8L1Q8TE68 723 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 DHX38Q92620 1227 aaKnown RBP12.48□□□□□ -0.41
C9orf3-203ENST00000375315 E2F7Q96AV8 911 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 KCNK16Q96T55 309 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 TRIM56Q9BRZ2 755 aaKnown RBP12.48□□□□□ -0.41
C9orf3-203ENST00000375315 ARMC7Q9H6L4 198 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 PDLIM7Q9NR12 457 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 SSTR1P30872 391 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 ESRRGP62508 458 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 ATP1A4Q13733 1029 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 MAMDC4Q6UXC1 1216 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 FBXW8Q8N3Y1 598 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 CHPT1Q8WUD6 406 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 DCAKDQ8WVC6 231 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 ANKRD36BP1Q96IX9 119 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 HGH1Q9BTY7 390 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 APOL6Q9BWW8 343 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 PARVBQ9HBI1 364 aa12.48□□□□□ -0.41
C9orf3-203ENST00000375315 MARCOQ9UEW3 520 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-203ENST00000375315 IGKV6D-21A0A0A0MT36 114 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 ZBTB42B2RXF5 422 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 COPEO14579 308 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
C9orf3-203ENST00000375315 SLC10A3P09131 477 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 FLT3LGP49771 235 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 EEF1DP3Q658K8 133 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 TLK2Q86UE8 772 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 HPS6Q86YV9 775 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 TMIGD2Q96BF3 282 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 STRA6Q9BX79 667 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 TMEM117Q9H0C3 514 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 ATAD3AQ9NVI7 634 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 DMAC2Q9NW81 257 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 GID8Q9NWU2 228 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 CLUHO75153 1309 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-203ENST00000375315 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-203ENST00000375315 PRKCBP05771 671 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 CAP1Q01518 475 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 SLC18A2Q05940 514 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 ADGRE1Q14246 886 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 NDUFA5Q16718 116 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 TMEM192Q8IY95 271 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 DEFB107AQ8IZN7 70 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 SEMA4DQ92854 862 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 RANBP9Q96S59 729 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 VTA1Q9NP79 307 aa12.47□□□□□ -0.41
C9orf3-203ENST00000375315 NOCTQ9UK39 431 aaKnown RBP12.47□□□□□ -0.41
C9orf3-203ENST00000375315 LAMA2P24043 3122 aaKnown RBP12.47□□□□□ -0.41
C9orf3-203ENST00000375315 SDR42E2A6NKP2 422 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 HBP1O60381 514 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 SORBS2O94875 1100 aaKnown RBP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 KRT5P13647 590 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 ACAT1P24752 427 aaKnown RBP12.46□□□□□ -0.41
C9orf3-203ENST00000375315 PCYT1AP49585 367 aa12.46□□□□□ -0.41
C9orf3-203ENST00000375315 PTP4A2Q12974 167 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms