RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 USP3Q9Y6I4 520 aa8.46□□□□□ -1.05
UBR4-202ENST00000375224 CCT8L1PA6NM43 557 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 MEIS3P2A8K0S8 358 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 SNX3O60493 162 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 BEST1O76090 585 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 APRTP07741 180 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 GOT1P17174 413 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 CA4P22748 312 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 CD52P31358 61 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 HCAR3P49019 387 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 MPP2Q14168 576 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 RGS9BPQ6ZS82 235 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 RNF180Q86T96 592 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 SCML4Q8N228 414 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 LZICQ8WZA0 190 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 PCED1BQ96HM7 432 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 OLFM3Q96PB7 478 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 BRD8Q9H0E9 1235 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 AGO3Q9H9G7 860 aaKnown RBP8.46□□□□□ -1.06
UBR4-202ENST00000375224 ARHGEF4Q9NR80 690 aa8.46□□□□□ -1.06
UBR4-202ENST00000375224 A0A0A0MRY4 1105 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 MYBPHLA2RUH7 354 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 KBTBD13C9JR72 458 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 EEF2KO00418 725 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 TM9SF1O15321 606 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 NCAM2O15394 837 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 OPHN1O60890 802 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ASMTLO95671 621 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 LTFP02788 710 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 MLNP12872 115 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 HOXD10P28358 340 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 GLUD2P49448 558 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 PRKCZQ05513 592 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 SCAPQ12770 1279 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 TUSC3Q13454 348 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 SEMA5AQ13591 1074 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 PAFAH1B3Q15102 231 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 KIAA0319Q5VV43 1072 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 CCDC110Q8TBZ0 833 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 DENND1AQ8TEH3 1009 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 SLC44A1Q8WWI5 657 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 SPATA13Q96N96 652 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 SMOQ99835 787 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ARHGAP39Q9C0H5 1083 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 CSNK1G1Q9HCP0 422 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 PREBQ9HCU5 417 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ZC3H7BQ9UGR2 993 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 CASTOR2A6NHX0 329 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 MT-ND3P03897 115 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ADRA1BP35368 520 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 NDUFV1P49821 464 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 MRPS35P82673 323 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 SLC10A2Q12908 348 aaPredicted RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 NME3Q13232 169 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 TIGD5Q53EQ6 642 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 DCLRE1AQ6PJP8 1040 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 CCNJLQ8IV13 435 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 SLC7A14Q8TBB6 771 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 DCAKDQ8WVC6 231 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 BHMTQ93088 406 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 MRRFQ96E11 262 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 CORO1BQ9BR76 489 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ADAM33Q9BZ11 813 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 UBE2OQ9C0C9 1292 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 EIF2B3Q9NR50 452 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 TCRBV9S1A1TA0A576 114 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 TYROBPO43914 113 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 SPAG7O75391 227 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 B3GAT3O94766 335 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 GSTA1P08263 222 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 PRKAR2AP13861 404 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 TSPY1Q01534 308 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 LPIN1Q14693 890 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 INTS6LQ5JSJ4 861 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 ANKRD20A2Q5SQ80 823 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ANKRD20A1Q5TYW2 823 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ANKRD20A3Q5VUR7 823 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 CCSAPQ6IQ19 270 aaPredicted RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 FAM171BQ6P995 826 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 SLC26A11Q86WA9 606 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 CCDC63Q8NA47 563 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 RNF169Q8NCN4 708 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 CCT6BQ92526 530 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ADAM2Q99965 735 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 WDR83Q9BRX9 315 aaKnown RBP8.45□□□□□ -1.06
UBR4-202ENST00000375224 FGFR1OP2Q9NVK5 253 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ZNF180Q9UJW8 692 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ITGB1BP2Q9UKP3 347 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 ARL2BPQ9Y2Y0 163 aa8.45□□□□□ -1.06
UBR4-202ENST00000375224 M0QZQ0 153 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 MTSS1O43312 755 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 KRT37O76014 449 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 TROVE2P10155 538 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBR4-202ENST00000375224 NCAM1P13591 858 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 KRT4P19013 534 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 TYMPP19971 482 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 NRLP54845 237 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 ITGA7Q13683 1181 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 MTFR1Q15390 333 aa8.44□□□□□ -1.06
UBR4-202ENST00000375224 PDK4Q16654 411 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms