RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 MAP4P27816 1152 aaKnown RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 ADCYAP1R1P41586 468 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 PTPN5P54829 565 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 EEF1A1P68104 462 aaKnown RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 EEF1A2Q05639 463 aaKnown RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 BFSP1Q12934 665 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 ZNF177Q13360 481 aaPredicted RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 KARSQ15046 597 aaKnown RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 C6orf183Q5T699 404 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 EEF1A1P5Q5VTE0 462 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 PTCHD4Q6ZW05 846 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 ALDH16A1Q8IZ83 802 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.3□□□□□ -0.92
UBR4-201ENST00000375218 SLC22A14Q9Y267 594 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 PIAS3Q9Y6X2 628 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 TMEM120BA0PK00 339 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 HMX3A6NHT5 357 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 ARHGAP33O14559 1287 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 APBA3O96018 575 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 STAG3L3P0CL85 134 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 EEF1DP29692 281 aaKnown RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 ACAA2P42765 397 aaKnown RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 ARCN1P48444 511 aaKnown RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 FNTAP49354 379 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 CREB5Q02930 508 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 GRSF1Q12849 480 aaKnown RBP eCLIP9.3□□□□□ -0.92
UBR4-201ENST00000375218 IGSF22Q8N9C0 903 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 SNX31Q8N9S9 440 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 ZNF248Q8NDW4 579 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 FBXO32Q969P5 355 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 SPXQ9BT56 116 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 SEC63Q9UGP8 760 aaKnown RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 APPL1Q9UKG1 709 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 CLCA3PQ9Y6N3 262 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 LCTP09848 1927 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 MYH8P13535 1937 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 LOC100506127A0A0U1RQW1 187 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 FAM177BA6PVY3 158 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 POTECB2RU33 542 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 CRTAMO95727 393 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 SRGAP2BP0DMP2 458 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 IDO1P14902 403 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 NR2F2P24468 414 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 CALCOCO2Q13137 446 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 ME3Q16798 604 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 PIK3R6Q5UE93 754 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 C12orf56Q8IXR9 622 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 CRACR2BQ8N4Y2 399 aaPredicted RBP9.3□□□□□ -0.92
UBR4-201ENST00000375218 MAIP1Q8WWC4 291 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 CCDC77Q9BR77 488 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 HPS5Q9UPZ3 1129 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 NAALADL1Q9UQQ1 740 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 PCDHAC2Q9Y5I4 1007 aa9.3□□□□□ -0.92
UBR4-201ENST00000375218 TLR2O60603 784 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 IFNA14P01570 189 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 PTGIRP43119 386 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 TBCEQ15813 527 aaPredicted RBP9.29□□□□□ -0.92
UBR4-201ENST00000375218 SPDYAQ5MJ70 313 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 GRAMD4Q6IC98 578 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 FBXW8Q8N3Y1 598 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 SPACA9Q96E40 222 aaPredicted RBP9.29□□□□□ -0.92
UBR4-201ENST00000375218 FAM84AQ96KN4 292 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 ATP6V0BQ99437 205 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 EFHD1Q9BUP0 239 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 CALN1Q9BXU9 219 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 CENPHQ9H3R5 247 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 AZI2Q9H6S1 392 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 LRFN2Q9ULH4 789 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 STON1Q9Y6Q2 735 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 PTPDC1A2A3K4 754 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 GDF11O95390 407 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 PROCP04070 461 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 MRPL12P52815 198 aaKnown RBP9.29□□□□□ -0.92
UBR4-201ENST00000375218 ALDH18A1P54886 795 aaKnown RBP9.29□□□□□ -0.92
UBR4-201ENST00000375218 STIM1Q13586 685 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 E2F2Q14209 437 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 FAM110CQ1W6H9 321 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 PLA2G4FQ68DD2 849 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 SNRNP48Q6IEG0 339 aaKnown RBP9.29□□□□□ -0.92
UBR4-201ENST00000375218 GALNT18Q6P9A2 607 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 TTC23LQ6PF05 361 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 TNS4Q8IZW8 715 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 ARL14Q8N4G2 192 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 GPR152Q8TDT2 470 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 ERO1AQ96HE7 468 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 ZCCHC2Q9C0B9 1178 aaKnown RBP9.29□□□□□ -0.92
UBR4-201ENST00000375218 SPECC1L-ADORA2AF8WAN1 911 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 VEGFDO43915 354 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 IL1AP01583 271 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 FESP07332 822 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 CALM1P0DP23 149 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 CALM2P0DP24 149 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 CALM3P0DP25 149 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 AHCYP23526 432 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 CSTF2P33240 577 aaKnown RBP eCLIP9.29□□□□□ -0.92
UBR4-201ENST00000375218 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
UBR4-201ENST00000375218 ME1P48163 572 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 RNF4P78317 190 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 ARF5P84085 180 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 CUZD1Q86UP6 607 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms