RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ZNF410Q86VK4 478 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CCHCR1Q8TD31 782 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 MFSD3Q96ES6 412 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 AGAP2Q99490 1192 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 FAM167BQ9BTA0 163 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CRTAC1Q9NQ79 661 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 VANGL2Q9ULK5 521 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 STAP1Q9ULZ2 295 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 VCANP13611 3396 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 F2P00734 622 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ZNF865P0CJ78 1059 aaPredicted RBP11.12□□□□□ -0.63
CXCL12-203ENST00000374429 IRF1P10914 325 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 EFEMP1Q12805 493 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 MFSD14CQ5VZR4 134 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 BTBD8Q5XKL5 378 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 CLEC20AQ6ZU45 233 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ECHDC2Q86YB7 292 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ZNF280BQ86YH2 543 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 UBR7Q8N806 425 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 NAT8LQ8N9F0 302 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 RAET1EQ8TD07 263 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 MYLPFQ96A32 169 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 KLHL5Q96PQ7 755 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TSSK1BQ9BXA7 367 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 PAK5Q9P286 719 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 CNTN6Q9UQ52 1028 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 IQANK1A0A1B0GTG1 560 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 GCAP28676 217 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 SERPINB3P29508 390 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 STIP1P31948 543 aaKnown RBP11.12□□□□□ -0.63
CXCL12-203ENST00000374429 PURAQ00577 322 aaKnown RBP11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ZNF460Q14592 562 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 UNC5AQ6ZN44 842 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 OTOAQ7RTW8 1153 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 SHCBP1Q8NEM2 672 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 CKAP2Q8WWK9 683 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 EXOC2Q96KP1 924 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ZNF778Q96MU6 729 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 SRPK1Q96SB4 655 aaKnown RBP11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ANLNQ9NQW6 1124 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ZFP69BQ9UJL9 534 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ARL2BPQ9Y2Y0 163 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 FER1L6Q2WGJ9 1857 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TCRBV5S1A1TA0A578 114 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 SLC15A5A6NIM6 579 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 PHGDHO43175 533 aaKnown RBP11.12□□□□□ -0.63
CXCL12-203ENST00000374429 MGEA5O60502 916 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 PQBP1O60828 265 aaKnown RBP11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TADA2AO75478 443 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 KRT37O76014 449 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 CHRNA1P02708 482 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 KRT16P08779 473 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TROVE2P10155 538 aaKnown RBP eCLIP11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TAF12Q16514 161 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 OVOS1Q6IE37 1185 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ALYREFQ86V81 257 aaKnown RBP11.12□□□□□ -0.63
CXCL12-203ENST00000374429 RASSF3Q86WH2 238 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 METTL23Q86XA0 190 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 CFAP52Q8N1V2 620 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 CCNYL1Q8N7R7 359 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TRPV1Q8NER1 839 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 NKD2Q969F2 451 aaPredicted RBP11.12□□□□□ -0.63
CXCL12-203ENST00000374429 MCUR1Q96AQ8 359 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TTC25Q96NG3 672 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 FERMT1Q9BQL6 677 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TRIM4Q9C037 500 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 ARHGEF4Q9NR80 690 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 CHRAC1Q9NRG0 131 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 TMLHEQ9NVH6 421 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 SLC39A10Q9ULF5 831 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 SHOC2Q9UQ13 582 aa11.12□□□□□ -0.63
CXCL12-203ENST00000374429 A0A0U1RQS6 177 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 MEI4A8MW99 385 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 DIAPH2O60879 1101 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 DGKIO75912 1065 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 SPATA31D3P0C874 917 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 MYL2P10916 166 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 VAV1P15498 845 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 TSPAN8P19075 237 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 PLK1P53350 603 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 SNX16P57768 344 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 VWA5B1Q5TIE3 1220 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 SPATA31D4Q6ZUB0 917 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 SPATA2LQ8IUW3 424 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-203ENST00000374429 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 AGGF1Q8N302 714 aaeCLIP11.11□□□□□ -0.63
CXCL12-203ENST00000374429 DRAXINQ8NBI3 349 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-203ENST00000374429 STAMBPL1Q96FJ0 436 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 KATNBL1Q9H079 304 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 SYBUQ9NX95 663 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 SMPD4Q9NXE4 827 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 ANKRD12Q6UB98 2062 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 EYSQ5T1H1 3165 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 ARHGAP42A6NI28 874 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 BAG2O95816 211 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 CHRNA4P43681 627 aa11.11□□□□□ -0.63
CXCL12-203ENST00000374429 MRPS5P82675 430 aaKnown RBP11.11□□□□□ -0.63
CXCL12-203ENST00000374429 MRPS6P82932 125 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms