RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 XPO7Q9UIA9 1087 aaKnown RBP22.51■■□□□ 1.19
CCDC28B-201ENST00000373602 TYW5A2RUC4 315 aaKnown RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 MOCS2O96007 188 aaPredicted RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 ATP5BP06576 529 aaKnown RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 DLDP09622 509 aaKnown RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 PNMA6AP0CW24 399 aaPredicted RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 KRT9P35527 623 aa22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 BPIFB4P59827 614 aa22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 PITX1P78337 314 aaPredicted RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 CAMK2GQ13555 558 aaPredicted RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 DUOXA1Q1HG43 343 aa22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 FNDC3BQ53EP0 1204 aaKnown RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 EFHC1Q5JVL4 640 aa22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 DAB2IPQ5VWQ8 1189 aa22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 C1orf131Q8NDD1 294 aaKnown RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 CEP76Q8TAP6 659 aa22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 PRCCQ92733 491 aaPredicted RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 HSPA12BQ96MM6 686 aa22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 SLC2A13Q96QE2 648 aa22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 WSB2Q9NYS7 404 aaPredicted RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 MUC22E2RYF6 1773 aaPredicted RBP22.5■■□□□ 1.19
CCDC28B-201ENST00000373602 CNOT1A5YKK6 2376 aaKnown RBP22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 HSF2BPO75031 334 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 IGLV3-19P01714 112 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 C7P10643 843 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 POLR2EP19388 210 aaKnown RBP22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 EEF1GP26641 437 aaKnown RBP22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 TPMTP51580 245 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 DCAF6Q58WW2 860 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 TCP11X2Q5H9J9 407 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 KLHDC7AQ5VTJ3 777 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 C11orf57Q6ZUT1 292 aaPredicted RBP22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 RABEPKQ7Z6M1 372 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 DEFB106AQ8N104 65 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 OR2T3Q8NH03 318 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 ENOX1Q8TC92 643 aaKnown RBP22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 FOXJ1Q92949 421 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 TOE1Q96GM8 510 aaKnown RBP22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 BTN2A3PQ96KV6 586 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 SLC6A14Q9UN76 642 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 FHOD1Q9Y613 1164 aa22.49■■□□□ 1.19
CCDC28B-201ENST00000373602 PI4KAP42356 2102 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 KCNK5O95279 499 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 ERBB2P04626 1255 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 TACR2P21452 398 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 KCNA4P22459 653 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 OXTRP30559 389 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 SNX16P57768 344 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 CDK17Q00537 523 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 DRAP1Q14919 205 aaPredicted RBP22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 OR6B2Q6IFH4 312 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 RBM43Q6ZSC3 357 aaKnown RBP22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 FAM183BPQ6ZVS7 135 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 CARNMT1Q8N4J0 409 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 GPT2Q8TD30 523 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 TTC17Q96AE7 1141 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 GBP4Q96PP9 640 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 NFE2L3Q9Y4A8 694 aa22.48■■□□□ 1.19
CCDC28B-201ENST00000373602 PES1O00541 588 aaKnown RBP22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 LUC7L3O95232 432 aaKnown RBP22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 CFIP05156 583 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 SERPINF2P08697 491 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 ENGP17813 658 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 CDH18Q13634 790 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 RAPGEF1Q13905 1077 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 PTPN20Q4JDL3 420 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 RAP1GAP2Q684P5 730 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 OLFML1Q6UWY5 402 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 CHSY1Q86X52 802 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 CCDC117Q8IWD4 279 aaPredicted RBP22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 LGI2Q8N0V4 545 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 CFAP52Q8N1V2 620 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 ZNF366Q8N895 744 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 ATP6V0D2Q8N8Y2 350 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 NAA15Q9BXJ9 866 aaKnown RBP22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 FAM204AQ9H8W3 233 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 CAPN10Q9HC96 672 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 INTS6Q9UL03 887 aaKnown RBP22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 CEP83Q9Y592 693 aa22.47■■□□□ 1.19
CCDC28B-201ENST00000373602 KCNU1A8MYU2 1149 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 GRAP2O75791 330 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 SLC2A3P11169 496 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 ACADMP11310 421 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 UCHL3P15374 230 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 CYP11B1P15538 503 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 CDH5P33151 784 aaPredicted RBP22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 SLC6A3Q01959 620 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 FSCBQ5H9T9 825 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 WDR45BQ5MNZ6 344 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 SYCP2LQ5T4T6 812 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 N4BP2L1Q5TBK1 243 aaPredicted RBP22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 SLC26A9Q7LBE3 791 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 RGL4Q8IZJ4 473 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 ZNF397Q8NF99 534 aaPredicted RBP22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 CADM4Q8NFZ8 388 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 MYO19Q96H55 970 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 PRMT1Q99873 361 aaKnown RBP22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 GPR174Q9BXC1 333 aa22.46■■□□□ 1.19
CCDC28B-201ENST00000373602 FBRSQ9HAH7 460 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms