RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 L1CAMP32004 1257 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 FCGRTP55899 365 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 CDC42EP1Q00587 391 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 YWHAHQ04917 246 aaPredicted RBP13.57□□□□□ -0.24
NCDN-203ENST00000373253 STX3Q13277 289 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 ZRSR2Q15696 482 aaKnown RBP13.57□□□□□ -0.24
NCDN-203ENST00000373253 DLG2Q15700 870 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 FASTKD1Q53R41 847 aaKnown RBP13.57□□□□□ -0.24
NCDN-203ENST00000373253 TTC7BQ86TV6 843 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 NAT8LQ8N9F0 302 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 SMC1BQ8NDV3 1235 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 NSMCE1Q8WV22 266 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 MFSD3Q96ES6 412 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 APBA2Q99767 749 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 ADAMTS10Q9H324 1103 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 CYP4F12Q9HCS2 524 aa13.57□□□□□ -0.24
NCDN-203ENST00000373253 LAMA3Q16787 3333 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 GPR182O15218 404 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 PQBP1O60828 265 aaKnown RBP13.56□□□□□ -0.24
NCDN-203ENST00000373253 APOEP02649 317 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 PDHA1P08559 390 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 KRT16P08779 473 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 CSH1P0DML2 217 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 CSH2P0DML3 217 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 NFKB1P19838 968 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 PAX7P23759 505 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 RASSF2P50749 326 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 PLK1P53350 603 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 USP10Q14694 798 aaKnown RBP13.56□□□□□ -0.24
NCDN-203ENST00000373253 N4BP2L1Q5TBK1 243 aaPredicted RBP13.56□□□□□ -0.24
NCDN-203ENST00000373253 FAM171A1Q5VUB5 890 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 CST9Q5W186 159 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 CLEC20AQ6ZU45 233 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 LRRC52Q8N7C0 313 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 KLHL5Q96PQ7 755 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 TMEM120AQ9BXJ8 343 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 FOXP3Q9BZS1 431 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 MAN1C1Q9NR34 630 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 TXLNGQ9NUQ3 528 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 SENP1Q9P0U3 644 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 CNTN6Q9UQ52 1028 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 TRPV2Q9Y5S1 764 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 MEI4A8MW99 385 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 ZMPSTE24O75844 475 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 CHRM1P11229 460 aaPredicted RBP13.56□□□□□ -0.24
NCDN-203ENST00000373253 SP100P23497 879 aaPredicted RBP13.56□□□□□ -0.24
NCDN-203ENST00000373253 NOS2P35228 1153 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 CCL23P55773 120 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 ITGA9Q13797 1035 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 TAF2Q6P1X5 1199 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 SUGP1Q8IWZ8 645 aaKnown RBP13.56□□□□□ -0.24
NCDN-203ENST00000373253 CCT6BQ92526 530 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 CHST12Q9NRB3 414 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 SMPD4Q9NXE4 827 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 GJD2Q9UKL4 321 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 TRIP11Q15643 1979 aa13.56□□□□□ -0.24
NCDN-203ENST00000373253 AOC2O75106 756 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 DCTN3O75935 186 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 ITGB1P05556 798 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 POLBP06746 335 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 ODC1P11926 461 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 CACNA2D1P54289 1103 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 PPP1R15BQ5SWA1 713 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 C6orf163Q5TEZ5 329 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 UNC93AQ86WB7 457 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 FNIP1Q8TF40 1166 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 NUDCD1Q96RS6 583 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 TASP1Q9H6P5 420 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 SARS2Q9NP81 518 aaKnown RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 SLC24A2Q9UI40 661 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 NME7Q9Y5B8 376 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 B2RBV5 119 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 TP73O15350 636 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 VAPBO95292 243 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 CCND3P30281 292 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 GARSP41250 739 aaKnown RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 HTRA3P83110 453 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 NAIF1Q69YI7 327 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 ALYREFQ86V81 257 aaKnown RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 PTPRN2Q92932 1015 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 EXOC2Q96KP1 924 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 THTPAQ9BU02 230 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 PRDM5Q9NQX1 630 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 MANSC4A6NHS7 340 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 C3orf70A6NLC5 250 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 TXNDC9O14530 226 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 ZBTB24O43167 697 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 ZWINTO95229 277 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 NQO1P15559 274 aaKnown RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 CTBP1Q13363 440 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 ISLR2Q6UXK2 745 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 CIR1Q86X95 450 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 C3orf58Q8NDZ4 430 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 KBTBD7Q8WVZ9 684 aa13.55□□□□□ -0.24
NCDN-203ENST00000373253 SREK1Q8WXA9 508 aaKnown RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 ZNF512Q96ME7 567 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 RPRD1AQ96P16 312 aaPredicted RBP13.55□□□□□ -0.24
NCDN-203ENST00000373253 NT5MQ9NPB1 228 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms