RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 IRF2BPLQ9H1B7 796 aa11.5□□□□□ -0.57
SYNPO2L-201ENST00000372873 CCDC167Q9P0B6 97 aa11.5□□□□□ -0.57
SYNPO2L-201ENST00000372873 ASTN1O14525 1302 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 PIK3R1P27986 724 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 EPHA3P29320 983 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 NKX2-5P52952 324 aaPredicted RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ABCE1P61221 599 aaKnown RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 IFRD2Q12894 506 aaPredicted RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 CCNIQ14094 377 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 DGKDQ16760 1214 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 QRICH1Q2TAL8 776 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ZFP69Q49AA0 526 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ZBTB41Q5SVQ8 909 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 HEATR6Q6AI08 1181 aaKnown RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 OR6B2Q6IFH4 312 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 LLGL2Q6P1M3 1020 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 RNF135Q8IUD6 432 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 OFCC1Q8IZS5 231 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 PARP8Q8N3A8 854 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ANKLE1Q8NAG6 615 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ARPC5LQ9BPX5 153 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 STN1Q9H668 368 aaKnown RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 XPNPEP1Q9NQW7 623 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 SRCAPQ6ZRS2 3230 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 FAM47E-STBD1D6RA91 191 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 INPP4BO15327 924 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 RGS5O15539 181 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 WDR47O94967 919 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 KRT6AP02538 564 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 KRT6BP04259 564 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 NME5P56597 212 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 FMO1Q01740 532 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 FAM47CQ5HY64 1035 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 DEPDC1Q5TB30 811 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ZNF720Q7Z2F6 126 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 TAS1R2Q8TE23 839 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 SEPHS2Q99611 448 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ASPSCR1Q9BZE9 553 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 TUT1Q9H6E5 874 aaKnown RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 IL17RBQ9NRM6 502 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ZNF221Q9UK13 617 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 SLIT3O75094 1523 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ILVBLA1L0T0 632 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 DENND3A2RUS2 1198 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 TMEM114B3SHH9 223 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 TRIM38O00635 465 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 XRCC1P18887 633 aaPredicted RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 RPL22P35268 128 aaKnown RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 TAS2R40P59535 323 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 HNRNPDQ14103 355 aaKnown RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 CCSAPQ6IQ19 270 aaPredicted RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 FBXL19Q6PCT2 694 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 TUBA3EQ6PEY2 450 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 FRMD7Q6ZUT3 714 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 SLC15A3Q8IY34 581 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 TCAIMQ8N3R3 496 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 GIPC2Q8TF65 315 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 RORBQ92753 470 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 TCF12Q99081 682 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 LXNQ9BS40 222 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 CENPOQ9BU64 300 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 VPS33BQ9H267 617 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 WDR55Q9H6Y2 383 aaPredicted RBP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 ERVK-11Q9UQG0 969 aa11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.49□□□□□ -0.57
SYNPO2L-201ENST00000372873 MT-CO1P00395 513 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 GARTP22102 1010 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 PSME3P61289 254 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 CCDC85BQ15834 202 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 KCNJ8Q15842 424 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 CBWD2Q8IUF1 395 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 RP9Q8TA86 221 aaKnown RBP11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 SLC44A1Q8WWI5 657 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 APBB2Q92870 758 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 EXT2Q93063 718 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 SGF29Q96ES7 293 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 ADPGKQ9BRR6 497 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 SIX2Q9NPC8 291 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 GDAP2Q9NXN4 497 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 HSFX1Q9UBD0 423 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 NARFQ9UHQ1 456 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 RPS6KA4O75676 772 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 FARP2O94887 1054 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 AOC1P19801 751 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 ITGAXP20702 1163 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 IL12AP29459 219 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 SPRP35270 261 aaPredicted RBP11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 NAMPTP43490 491 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 PRELPP51888 382 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 KPNA2P52292 529 aaKnown RBP11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 THOP1P52888 689 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 SLC12A3P55017 1021 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 PPP3CAQ08209 521 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 MRPL28Q13084 256 aaKnown RBP11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 TMTC4Q5T4D3 741 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 TXNRD3Q86VQ6 643 aa11.48□□□□□ -0.57
SYNPO2L-201ENST00000372873 CBR4Q8N4T8 237 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms