RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 SFRP4Q6FHJ7 346 aaPredicted RBP1.97□□□□□ -2.09
UBE2A-203ENST00000371569 FBXO46Q6PJ61 603 aaPredicted RBP1.97□□□□□ -2.09
UBE2A-203ENST00000371569 Q6ZUG5 572 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 USP30Q70CQ3 517 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 GPRIN1Q7Z2K8 1008 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 AFAP1Q8N556 730 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 PTGR2Q8N8N7 351 aaPredicted RBP1.97□□□□□ -2.09
UBE2A-203ENST00000371569 SMARCC2Q8TAQ2 1214 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 SLC2A12Q8TD20 617 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 RAPGEF4Q8WZA2 1011 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 CALML4Q96GE6 196 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 CNDP2Q96KP4 475 aaKnown RBP1.97□□□□□ -2.09
UBE2A-203ENST00000371569 EYA3Q99504 573 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 MYOCQ99972 504 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 MRIQ9BWK5 157 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 ITPAQ9BY32 194 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 GSTO2Q9H4Y5 243 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 BCAS3Q9H6U6 928 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 BEX4Q9NWD9 120 aaPredicted RBP1.97□□□□□ -2.09
UBE2A-203ENST00000371569 HCFC1R1Q9NWW0 138 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 SLC25A10Q9UBX3 287 aaPredicted RBP1.97□□□□□ -2.09
UBE2A-203ENST00000371569 CROTQ9UKG9 612 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 USP22Q9UPT9 525 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 ZBTB1Q9Y2K1 713 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 GDAQ9Y2T3 454 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 RBM8AQ9Y5S9 174 aaKnown RBP1.97□□□□□ -2.09
UBE2A-203ENST00000371569 PSAT1Q9Y617 370 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 ADGRB1O14514 1584 aa1.97□□□□□ -2.09
UBE2A-203ENST00000371569 BRCA1P38398 1863 aaKnown RBP1.97□□□□□ -2.09
UBE2A-203ENST00000371569 TUBGCP6Q96RT7 1819 aa1.96□□□□□ -2.09
UBE2A-203ENST00000371569 TIAM2Q8IVF5 1701 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 INSRP06213 1382 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 PROB1E7EW31 1015 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 WNT10BO00744 389 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 CLGNO14967 610 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 FYB1O15117 783 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 VILLO15195 856 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 ZSCAN9O15535 394 aaPredicted RBP1.96□□□□□ -2.1
UBE2A-203ENST00000371569 PPP6R2O75170 966 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 TAF5LO75529 589 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 AGFG2O95081 481 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 PTMAP06454 111 aaKnown RBP1.96□□□□□ -2.1
UBE2A-203ENST00000371569 CD19P15391 556 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 ZNF28P17035 718 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 KCNA3P22001 575 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 IGFBP6P24592 240 aaPredicted RBP1.96□□□□□ -2.1
UBE2A-203ENST00000371569 MGAT1P26572 445 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 EEF1DP29692 281 aaKnown RBP1.96□□□□□ -2.1
UBE2A-203ENST00000371569 PPIFP30405 207 aaKnown RBP1.96□□□□□ -2.1
UBE2A-203ENST00000371569 IL13P35225 146 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 ACTN2P35609 894 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 CASRP41180 1078 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 MMP14P50281 582 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 MC1RQ01726 317 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 HGFACQ04756 655 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 STK4Q13043 487 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 RTP5Q14D33 572 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 BTBD16Q32M84 506 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 GALNTL6Q49A17 601 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 ZNF569Q5MCW4 686 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 DEPDC1Q5TB30 811 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 KIAA1614Q5VZ46 1190 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 TRMT10BQ6PF06 316 aaKnown RBP1.96□□□□□ -2.1
UBE2A-203ENST00000371569 MTHFD1LQ6UB35 978 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 LAYNQ6UX15 382 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 LARP4Q71RC2 724 aaKnown RBP eCLIP1.96□□□□□ -2.1
UBE2A-203ENST00000371569 Q7L0L9 218 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 SYT13Q7L8C5 426 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 ADGRA1Q86SQ6 560 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 SPARTQ8N0X7 666 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 CHCHD4Q8N4Q1 142 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 SUN3Q8TAQ9 357 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 POC1BQ8TC44 478 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 NEK9Q8TD19 979 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 BPIFB1Q8TDL5 484 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 HMGB4Q8WW32 186 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 SAAL1Q96ER3 474 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 KLHL32Q96NJ5 620 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 PIGSQ96S52 555 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 SMOQ99835 787 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 PTDSS2Q9BVG9 487 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 OR10A4Q9H209 315 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 RABEP2Q9H5N1 569 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 ERVMER34-1Q9H9K5 563 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 KCNK9Q9NPC2 374 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 MARCH4Q9P2E8 410 aaPredicted RBP1.96□□□□□ -2.1
UBE2A-203ENST00000371569 ADD3Q9UEY8 706 aaKnown RBP1.96□□□□□ -2.1
UBE2A-203ENST00000371569 HSF4Q9ULV5 492 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 SLC45A2Q9UMX9 530 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 ZNF711Q9Y462 761 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 IRAK3Q9Y616 596 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 ATP7BP35670 1465 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 PNPLA7Q6ZV29 1317 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 E9PLN8 166 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 STX16-NPEPL1H3BU86 382 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 TAF4O00268 1085 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 STX16O14662 325 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 DCLK1O15075 740 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 MATN3O15232 486 aa1.96□□□□□ -2.1
UBE2A-203ENST00000371569 HOXA3O43365 443 aaPredicted RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms