RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ASNSP08243 561 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 NEK3P51956 506 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 PSME3P61289 254 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 BROXQ5VW32 411 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
GPC4-201ENST00000370828 SFRP1Q8N474 314 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 FIG4Q92562 907 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 ACSS3Q9H6R3 686 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 GIN1Q9NXP7 522 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 SPATA2Q9UM82 520 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 RPTORQ8N122 1335 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 EPN2O95208 641 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 ZNF682O95780 498 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 MGAT1P26572 445 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 SLC10A5Q5PT55 438 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 C6orf183Q5T699 404 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 PLEKHM3Q6ZWE6 761 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 RRM2BQ7LG56 351 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 KATNAL2Q8IYT4 538 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 BPIFB6Q8NFQ5 453 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 SPON2Q9BUD6 331 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 TEX12Q9BXU0 123 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 MOV10Q9HCE1 1003 aaKnown RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 CHMP1AQ9HD42 196 aaPredicted RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 JPH1Q9HDC5 661 aaPredicted RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 KCNH7Q9NS40 1196 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 MPP6Q9NZW5 540 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 PTPRMP28827 1452 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 LOC100506127A0A0U1RQW1 187 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 A0A1W2PRG6 482 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 VWA5AO00534 786 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 BIRC5O15392 142 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 STX7O15400 261 aaKnown RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 ALOX5P09917 674 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 FECHP22830 423 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 ADAM17P78536 824 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 FAM98BQ52LJ0 330 aaKnown RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 MTX3Q5HYI7 312 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 UNC45BQ8IWX7 931 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 ATPAF2Q8N5M1 289 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 ZFAND2BQ8WV99 257 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 CITED4Q96RK1 184 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 FBXO40Q9UH90 709 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 NDUFAF1Q9Y375 327 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 IGSF9BQ9UPX0 1349 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 RGSL1A5PLK6 1076 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 TISP43B9A030 160 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 BNC1Q01954 994 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 ARHGAP17Q68EM7 881 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 GALNT18Q6P9A2 607 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 C19orf18Q8NEA5 215 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 ASZ1Q8WWH4 475 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 RIT2Q99578 217 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 MXRA8Q9BRK3 442 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 TMEM109Q9BVC6 243 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 MARCH7Q9H992 704 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 VTA1Q9NP79 307 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 PNPOQ9NVS9 261 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 VTI1BQ9UEU0 232 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 SNPHO15079 494 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 KLRK1P26718 216 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 RPL22P35268 128 aaKnown RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 NAGLUP54802 743 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 DLG4P78352 724 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 ZNF846Q147U1 533 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 XKR3Q5GH77 459 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 PACS1Q6VY07 963 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 AKAP14Q86UN6 197 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 SCN4BQ8IWT1 228 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 COLGALT1Q8NBJ5 622 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 FAM172AQ8WUF8 416 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 PABPC5Q96DU9 382 aaKnown RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 HSPBAP1Q96EW2 488 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 FAM167AQ96KS9 214 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 SMAD5Q99717 465 aaKnown RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 SPOCK3Q9BQ16 436 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 PCDH18Q9HCL0 1135 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 RPRD1BQ9NQG5 326 aaKnown RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 AVENQ9NQS1 362 aaPredicted RBP12.97□□□□□ -0.33
GPC4-201ENST00000370828 FAM8A1Q9UBU6 413 aa12.97□□□□□ -0.33
GPC4-201ENST00000370828 NCF1BA6NI72 391 aaPredicted RBP12.96□□□□□ -0.33
GPC4-201ENST00000370828 CENPXA8MT69 81 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 NCF1CA8MVU1 366 aaPredicted RBP12.96□□□□□ -0.33
GPC4-201ENST00000370828 PSMD3O43242 534 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 NDUFS3O75489 264 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 MYO1DO94832 1006 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 NCF1P14598 390 aaPredicted RBP12.96□□□□□ -0.33
GPC4-201ENST00000370828 IREB2P48200 963 aaKnown RBP12.96□□□□□ -0.33
GPC4-201ENST00000370828 EFNA5P52803 228 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 PLK1P53350 603 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 POU4F1Q01851 419 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 PPP3CAQ08209 521 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 EMC2Q15006 297 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 GOLGA7BQ2TAP0 167 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 C8orf59Q8N0T1 100 aaPredicted RBP12.96□□□□□ -0.33
GPC4-201ENST00000370828 KCTD4Q8WVF5 259 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 DNAJC19Q96DA6 116 aa12.96□□□□□ -0.33
GPC4-201ENST00000370828 OLFM1Q99784 485 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms