RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 ADGRE1Q14246 886 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 INSCQ1MX18 579 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 ZNF781Q8N8C0 355 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 DEPDC1BQ8WUY9 529 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 ADPGKQ9BRR6 497 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 MCMBPQ9BTE3 642 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 MRPS26Q9BYN8 205 aaKnown RBP18.03■□□□□ 0.48
CHUK-201ENST00000370397 GBA2Q9HCG7 927 aaPredicted RBP18.03■□□□□ 0.48
CHUK-201ENST00000370397 LOC100653049A0A140TA62 436 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 APOL1O14791 398 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 KRT34O76011 436 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 ZBED1O96006 694 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 TMEM259Q4ZIN3 620 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 SCAF8Q9UPN6 1271 aaKnown RBP18.03■□□□□ 0.48
CHUK-201ENST00000370397 CEPT1Q9Y6K0 416 aa18.03■□□□□ 0.48
CHUK-201ENST00000370397 WDR27A2RRH5 827 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 MAFO75444 373 aaPredicted RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 CLPTM1O96005 669 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 CD19P15391 556 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 CHRNA5P30532 468 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 MS4A2Q01362 244 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 DUS1LQ6P1R4 473 aaKnown RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 ISLR2Q6UXK2 745 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 CLEC14AQ86T13 490 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 ZNF410Q86VK4 478 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 TMEM102Q8N9M5 508 aaPredicted RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 PRPF31Q8WWY3 499 aaKnown RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 LENG8Q96PV6 779 aaPredicted RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 OR52B2Q96RD2 323 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 ZNF670Q9BS34 389 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 SNRNP25Q9BV90 132 aaKnown RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 MAN1C1Q9NR34 630 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 ZNF510Q9Y2H8 683 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 NR2E3Q9Y5X4 410 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 USP3Q9Y6I4 520 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 TSC2P49815 1807 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 TFE3P19532 575 aaPredicted RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 ICAM3P32942 547 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 TFAMQ00059 246 aaKnown RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 OLFML1Q6UWY5 402 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 PLD6Q8N2A8 252 aaKnown RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 RNPEPQ9H4A4 650 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 NXF1Q9UBU9 619 aaKnown RBP18.02■□□□□ 0.48
CHUK-201ENST00000370397 DCDC2Q9UHG0 476 aa18.02■□□□□ 0.48
CHUK-201ENST00000370397 MDM4O15151 490 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 SERPINB6P35237 376 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 THOP1P52888 689 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 CRADDP78560 199 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 TMEM151AQ8N4L1 468 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 QKIQ96PU8 341 aaKnown RBP eCLIP18.02■□□□□ 0.47
CHUK-201ENST00000370397 CDH19Q9H159 772 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 PACSIN3Q9UKS6 424 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 ARHGAP26Q9UNA1 814 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 DMTF1Q9Y222 760 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 AFG3L2Q9Y4W6 797 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 AP4B1Q9Y6B7 739 aa18.02■□□□□ 0.47
CHUK-201ENST00000370397 IMPDH2P12268 514 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 SCNN1BP51168 640 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 HDAC4P56524 1084 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 BCAR1P56945 870 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 PPM1LQ5SGD2 360 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 TMEM176AQ96HP8 235 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 MRPL4Q9BYD3 311 aaKnown RBP18.01■□□□□ 0.47
CHUK-201ENST00000370397 PDGFRAP16234 1089 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 ITGA7Q13683 1181 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 PRKG1Q13976 671 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHUK-201ENST00000370397 PKDCCQ504Y2 493 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 TSHZ1Q6ZSZ6 1077 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 DEFB132Q7Z7B7 95 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 INO80BQ9C086 356 aaPredicted RBP18.01■□□□□ 0.47
CHUK-201ENST00000370397 VRTNQ9H8Y1 702 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 HESX1Q9UBX0 185 aa18.01■□□□□ 0.47
CHUK-201ENST00000370397 ACOT8O14734 319 aa18■□□□□ 0.47
CHUK-201ENST00000370397 FAM200BP0CF97 657 aa18■□□□□ 0.47
CHUK-201ENST00000370397 XRCC1P18887 633 aaPredicted RBP18■□□□□ 0.47
CHUK-201ENST00000370397 GRAMD1BQ3KR37 738 aa18■□□□□ 0.47
CHUK-201ENST00000370397 C4orf22Q6V702 233 aa18■□□□□ 0.47
CHUK-201ENST00000370397 RBM12BQ8IXT5 1001 aaKnown RBP18■□□□□ 0.47
CHUK-201ENST00000370397 ZFRQ96KR1 1074 aaKnown RBP18■□□□□ 0.47
CHUK-201ENST00000370397 KLHL32Q96NJ5 620 aa18■□□□□ 0.47
CHUK-201ENST00000370397 GRIP2Q9C0E4 1043 aa18■□□□□ 0.47
CHUK-201ENST00000370397 CCDC130P13994 396 aa18■□□□□ 0.47
CHUK-201ENST00000370397 CDH2P19022 906 aaPredicted RBP18■□□□□ 0.47
CHUK-201ENST00000370397 TRPC3Q13507 836 aa18■□□□□ 0.47
CHUK-201ENST00000370397 CDHR1Q96JP9 859 aa18■□□□□ 0.47
CHUK-201ENST00000370397 PRPF19Q9UMS4 504 aaKnown RBP18■□□□□ 0.47
CHUK-201ENST00000370397 MFHAS1Q9Y4C4 1052 aa18■□□□□ 0.47
CHUK-201ENST00000370397 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18■□□□□ 0.47
CHUK-201ENST00000370397 M0QYV0 167 aa18■□□□□ 0.47
CHUK-201ENST00000370397 PIK3R2O00459 728 aa18■□□□□ 0.47
CHUK-201ENST00000370397 RALBP11234 206 aa18■□□□□ 0.47
CHUK-201ENST00000370397 SULT2A1Q06520 285 aa18■□□□□ 0.47
CHUK-201ENST00000370397 CEACAM7Q14002 265 aa18■□□□□ 0.47
CHUK-201ENST00000370397 UBA3Q8TBC4 463 aa18■□□□□ 0.47
CHUK-201ENST00000370397 FAM96AQ9H5X1 160 aa18■□□□□ 0.47
CHUK-201ENST00000370397 PADI4Q9UM07 663 aa18■□□□□ 0.47
CHUK-201ENST00000370397 RPS6KL1Q9Y6S9 549 aa18■□□□□ 0.47
CHUK-201ENST00000370397 DGKIO75912 1065 aa17.99■□□□□ 0.47
CHUK-201ENST00000370397 CCDC166P0CW27 439 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms