RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TFE3P19532 575 aaPredicted RBP19.63■□□□□ 0.73
CKS1B-203ENST00000368439 TACR2P21452 398 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 STAT1P42224 750 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 MATKP42679 507 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 IQCB1Q15051 598 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 PTPRNQ16849 979 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 NAA35Q5VZE5 725 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 RAP1GAP2Q684P5 730 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 CHST9Q7L1S5 443 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 AHI1Q8N157 1196 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 CFAP52Q8N1V2 620 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 ATP6V0D2Q8N8Y2 350 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 NEK11Q8NG66 645 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 FIBINQ8TAL6 211 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 CPA5Q8WXQ8 436 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 SPAG5Q96R06 1193 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 CIPCQ9C0C6 399 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 SLC6A17Q9H1V8 727 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 STIM2Q9P246 746 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 PCDHGA5Q9Y5G8 931 aa19.63■□□□□ 0.73
CKS1B-203ENST00000368439 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.63■□□□□ 0.73
CKS1B-203ENST00000368439 PRKCHP24723 683 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 CCR1P32246 355 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 GBP1P32455 592 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 ZNF165P49910 485 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 LMAN2Q12907 356 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 ELF2Q15723 593 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 FUT11Q495W5 492 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 FSCBQ5H9T9 825 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 TRNP1Q6NT89 227 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 PRR23CQ6ZRP0 262 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 MFN1Q8IWA4 741 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 LGI2Q8N0V4 545 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 PGBD3Q8N328 593 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 MRGPRX1Q96LB2 322 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 PCMTD1Q96MG8 357 aaPredicted RBP19.62■□□□□ 0.73
CKS1B-203ENST00000368439 PCDHB18PQ96TA0 734 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 TMEM245Q9H330 911 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 RTN4Q9NQC3 1192 aaKnown RBP19.62■□□□□ 0.73
CKS1B-203ENST00000368439 TMEM59LQ9UK28 342 aa19.62■□□□□ 0.73
CKS1B-203ENST00000368439 INTS6Q9UL03 887 aaKnown RBP19.62■□□□□ 0.73
CKS1B-203ENST00000368439 SYNJ2BP-COX16A0A087WUM0 186 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 SMTNL1A8MU46 457 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 M0QYT0 321 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 ZNF806P0C7X5 589 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 SLC2A3P11169 496 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 UNGP13051 313 aaPredicted RBP19.61■□□□□ 0.73
CKS1B-203ENST00000368439 ID4P47928 161 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 LMNB2Q03252 620 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 CCDC6Q16204 474 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 FAM102AQ5T9C2 384 aaPredicted RBP19.61■□□□□ 0.73
CKS1B-203ENST00000368439 MBLAC2Q68D91 279 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 BNIPLQ7Z465 357 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 CHSY1Q86X52 802 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 ZNF557Q8N988 423 aaPredicted RBP19.61■□□□□ 0.73
CKS1B-203ENST00000368439 CYB5D2Q8WUJ1 264 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 TTC17Q96AE7 1141 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 PGAP3Q96FM1 320 aaPredicted RBP19.61■□□□□ 0.73
CKS1B-203ENST00000368439 MKRN2Q9H000 416 aaKnown RBP19.61■□□□□ 0.73
CKS1B-203ENST00000368439 CD93Q9NPY3 652 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 ANLNQ9NQW6 1124 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 PIGVQ9NUD9 493 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 DLL3Q9NYJ7 618 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 RRN3Q9NYV6 651 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.61■□□□□ 0.73
CKS1B-203ENST00000368439 COX16Q9P0S2 106 aa19.61■□□□□ 0.73
CKS1B-203ENST00000368439 LAMA1P25391 3075 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 IGHV1OR15-9A0A0B4J2B8 117 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 SYCE3A1L190 88 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 BCLAF3A2AJT9 711 aaKnown RBP19.6■□□□□ 0.73
CKS1B-203ENST00000368439 I6L893 689 aaPredicted RBP19.6■□□□□ 0.73
CKS1B-203ENST00000368439 LUC7L3O95232 432 aaKnown RBP19.6■□□□□ 0.73
CKS1B-203ENST00000368439 C7P10643 843 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 MMP8P22894 467 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 FLT3P36888 993 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 MPLP40238 635 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 CXCR3P49682 368 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 COPAP53621 1224 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 RNASE9P60153 205 aaKnown RBP19.6■□□□□ 0.73
CKS1B-203ENST00000368439 NME3Q13232 169 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 BYSLQ13895 437 aaKnown RBP19.6■□□□□ 0.73
CKS1B-203ENST00000368439 E2F5Q15329 346 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 ARCQ7LC44 396 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 CARNMT1Q8N4J0 409 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 MYO19Q96H55 970 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 SPACA7Q96KW9 195 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 SLC12A6Q9UHW9 1150 aa19.6■□□□□ 0.73
CKS1B-203ENST00000368439 GON4LQ3T8J9 2241 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 TYW5A2RUC4 315 aaKnown RBP19.59■□□□□ 0.73
CKS1B-203ENST00000368439 PRR5-ARHGAP8B1AHC4 643 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 F5H5T6 163 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 DLDP09622 509 aaKnown RBP19.59■□□□□ 0.73
CKS1B-203ENST00000368439 HLA-EP13747 358 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 ABCB4P21439 1286 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 ARHGAP8P85298 464 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 PTP4A2Q12974 167 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 STARD3Q14849 445 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 SF3A2Q15428 464 aaKnown RBP19.59■□□□□ 0.73
CKS1B-203ENST00000368439 RSPO4Q2I0M5 234 aaPredicted RBP19.59■□□□□ 0.73
CKS1B-203ENST00000368439 SLC25A52Q3SY17 297 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms