RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 STRA6Q9BX79 667 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 TEKT3Q9BXF9 490 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 EPN3Q9H201 632 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 BHMT2Q9H2M3 363 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 RANBP17Q9H2T7 1088 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 GP6Q9HCN6 339 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 ZFP64Q9NPA5 681 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 CHST7Q9NS84 486 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 GCNT4Q9P109 453 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 EPS15L1Q9UBC2 864 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 APEX2Q9UBZ4 518 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 LCMT1Q9UIC8 334 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 DUSP13Q9UII6 198 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 EXOC7Q9UPT5 735 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 LZTS1Q9Y250 596 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 NEUROG3Q9Y4Z2 214 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 AKAP9Q99996 3911 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 MIA3Q5JRA6 1907 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 LOC102724159A0A0B4J2E5 919 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 FAM221BA6H8Z2 402 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 FAM86B1E9PN63 330 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 H0YCG3 227 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 MEIS1O00470 390 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 KCNK3O14649 394 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 NDC80O14777 642 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 KIAA0391O15091 583 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 MAFGO15525 162 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 BUB1O43683 1085 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 MGEA5O60502 916 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 GAS7O60861 476 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 CAND2O75155 1236 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 GH1P01241 217 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 GLI1P08151 1106 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 FAM86B2P0C5J1 330 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 MYBL2P10244 700 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 SLC9A1P19634 815 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 ENDOUP21128 410 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 TNFAIP3P21580 790 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 MAN1A1P33908 653 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 GNGT1P63211 74 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 BNIP3Q12983 259 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 IKQ13123 557 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 IKZF1Q13422 519 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 HTR4Q13639 388 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 PWP2Q15269 919 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 HSDL1Q3SXM5 330 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 AASDHQ4L235 1098 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 FBXO47Q5MNV8 452 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 TCEAL6Q6IPX3 200 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 B3GNT9Q6UX72 402 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 SYDE1Q6ZW31 735 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 ENOSF1Q7L5Y1 443 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 TMC3Q7Z5M5 1100 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 NT5DC3Q86UY8 548 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 TMEFF1Q8IYR6 380 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 MYCT1Q8N699 235 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 AUTS2Q8WXX7 1259 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 TCEAL3Q969E4 200 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 EEF2KMTQ96G04 330 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 ZIM3Q96PE6 472 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 KRT12Q99456 494 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 TACO1Q9BSH4 297 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 HDAC8Q9BY41 377 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 ZHX3Q9H4I2 956 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 TMBIM4Q9HC24 238 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 SIX2Q9NPC8 291 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 NGRNQ9NPE2 291 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 TBC1D22BQ9NU19 505 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 SETD4Q9NVD3 440 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 RSPH14Q9UHP6 348 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 TFR2Q9UP52 801 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 SF3B6Q9Y3B4 125 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 ZNF451Q9Y4E5 1061 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 NAV3Q8IVL0 2385 aa6.82□□□□□ -1.32
ECHDC1-202ENST00000368289 CELSR1Q9NYQ6 3014 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 C17orf102A2RUQ5 167 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CCDC169A6NNP5 214 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 TMCO5BA8MYB1 307 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 F8VZ95 297 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 J3QKU1 62 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 KRIT1O00522 736 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 TGFB1I1O43294 461 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CEP104O60308 925 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ZC3H11AO75152 810 aaKnown RBP eCLIP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 RTN2O75298 545 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 KIAA0754O94854 1291 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 GJB6O95452 261 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 PRAMEF1O95521 474 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 FAM107AO95990 144 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 GSNP06396 782 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 PAEPP09466 180 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ZNF806P0C7X5 589 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CD8BP10966 210 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 NR1D1P20393 614 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CD52P31358 61 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 SFNP31947 248 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CHRNA3P32297 505 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CXCR5P32302 372 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 HOXD13P35453 343 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 MDH1P40925 334 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms