RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 AGKQ53H12 422 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 ANKRD7Q92527 254 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 RHBGQ9H310 441 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MFSD1Q9H3U5 465 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 ZFYVE1Q9HBF4 777 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 SLC40A1Q9NP59 571 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 RPS6KB2Q9UBS0 482 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 UBA2Q9UBT2 640 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 ZNF711Q9Y462 761 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 RTN3O95197 1032 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-207ENST00000368226 IGSF6O95976 241 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 PAPD7Q5XG87 772 aaKnown RBP13.18□□□□□ -0.3
PTPRK-207ENST00000368226 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 NIPA1Q7RTP0 329 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 KIRREL3Q8IZU9 778 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 CASP10Q92851 521 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 TM6SF2Q9BZW4 377 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 FAM50BQ9Y247 325 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 DCCP43146 1447 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 C16orf96A6NNT2 1141 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 USP1O94782 785 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 FAM153BP0C7A2 387 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 FAM153CQ494X1 144 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 ICE2Q659A1 982 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 RGL4Q8IZJ4 473 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 DNAJC9Q8WXX5 260 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 HAS1Q92839 578 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 MYOCQ99972 504 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 FAM153AQ9UHL3 310 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 CASZ1Q86V15 1759 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 PSMD10O75832 226 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 MMP14P50281 582 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 STX5Q13190 355 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 FIGNQ5HY92 759 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 KRT78Q8N1N4 520 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 BTN3A1O00481 513 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 ANGPT1Q15389 498 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 MID1IP1Q9NPA3 183 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 SCN3BQ9NY72 215 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 NRCAMQ92823 1304 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 MMP13P45452 471 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 CLK1P49759 484 aaKnown RBP13.18□□□□□ -0.3
PTPRK-207ENST00000368226 RENBPP51606 427 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 NCKAP1LP55160 1127 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 SFSWAPQ12872 951 aaKnown RBP13.18□□□□□ -0.3
PTPRK-207ENST00000368226 CAPSQ13938 189 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 DDR2Q16832 855 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 SETD3Q86TU7 594 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-207ENST00000368226 TRAPPC5Q8IUR0 188 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 C12orf29Q8N999 325 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 PCDH9Q9HC56 1237 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 ZNF112Q9UJU3 913 aa13.18□□□□□ -0.3
PTPRK-207ENST00000368226 BAZ2BQ9UIF8 2168 aaKnown RBP13.17□□□□□ -0.3
PTPRK-207ENST00000368226 RASSF10A6NK89 507 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 BANF1O75531 89 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 TRAF2Q12933 501 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 ATP13A4Q4VNC1 1196 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 KDM7AQ6ZMT4 941 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 VSIG10LQ86VR7 867 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 FIG4Q92562 907 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 IKZF4Q9H2S9 585 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 CDHR5Q9HBB8 845 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 RIPK2O43353 540 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 RPLP2P05387 115 aaKnown RBP13.17□□□□□ -0.3
PTPRK-207ENST00000368226 RBP1P09455 135 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 SLC1A6P48664 564 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 SUGP1Q8IWZ8 645 aaKnown RBP13.17□□□□□ -0.3
PTPRK-207ENST00000368226 MYLPFQ96A32 169 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 CCDC126Q96EE4 140 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 AHCYL2Q96HN2 611 aaKnown RBP13.17□□□□□ -0.3
PTPRK-207ENST00000368226 EXOC2Q96KP1 924 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 DEFB118Q96PH6 123 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 UMODL1Q5DID0 1318 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 LINC00854A0A1B0GVQ3 168 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 PSMD12O00232 456 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-207ENST00000368226 PHGDHO43175 533 aaKnown RBP13.17□□□□□ -0.3
PTPRK-207ENST00000368226 CD86P42081 329 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 GCNT1Q02742 428 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 IL17AQ16552 155 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 SETMARQ53H47 684 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-207ENST00000368226 ZNF697Q5TEC3 545 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 FBXL19Q6PCT2 694 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 TTC33Q6PID6 262 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-207ENST00000368226 RIPOR1Q6ZS17 1223 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 SEPHS2Q99611 448 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 DPP7Q9UHL4 492 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 ZBTB22O15209 634 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 TPBGLP0DKB5 382 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 PSMB4P28070 264 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 MAPK1P28482 360 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 RASA2Q15283 850 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 RGMBQ6NW40 437 aa13.17□□□□□ -0.3
PTPRK-207ENST00000368226 NECAB2Q7Z6G3 386 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms