RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SMOQ99835 787 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 KIF9Q9HAQ2 790 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 DMAP1Q9NPF5 467 aaPredicted RBP14.44□□□□□ -0.1
USF1-202ENST00000368020 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 TBX21Q9UL17 535 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 USH1CQ9Y6N9 552 aa14.44□□□□□ -0.1
USF1-202ENST00000368020 SDR42E2A6NKP2 422 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 FAM159BA6NKW6 160 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 AP3B1O00203 1094 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 RNF103O00237 685 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 DCLK1O15075 740 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 CREB3O43889 395 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 METTL18O95568 372 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 TROVE2P10155 538 aaKnown RBP eCLIP14.43□□□□□ -0.1
USF1-202ENST00000368020 NCAM1P13591 858 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 EN2P19622 333 aaPredicted RBP14.43□□□□□ -0.1
USF1-202ENST00000368020 TYMPP19971 482 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 TSPY1Q01534 308 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 ZNF33AQ06730 810 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 AP1B1Q10567 949 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 SLC1A5Q15758 541 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 LRRC26Q2I0M4 334 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 KIAA0319Q5VV43 1072 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 STEAP4Q687X5 459 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 PM20D1Q6GTS8 502 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 FAM171BQ6P995 826 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 LRRC8BQ6P9F7 803 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 CTAGE3PQ8IX95 158 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 PYROXD2Q8N2H3 581 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 COLGALT1Q8NBJ5 622 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 TCP10LQ8TDR4 215 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 SIGLEC10Q96LC7 697 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 HIPK3Q9H422 1215 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 AGO3Q9H9G7 860 aaKnown RBP14.43□□□□□ -0.1
USF1-202ENST00000368020 PIGVQ9NUD9 493 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 MAD1L1Q9Y6D9 718 aa14.43□□□□□ -0.1
USF1-202ENST00000368020 MYBPHLA2RUH7 354 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 CASTOR2A6NHX0 329 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 MEIS3P2A8K0S8 358 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 AVILO75366 819 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 IL1BP01584 269 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 CLTBP09497 229 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 NDUFV1P49821 464 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 IFRD2Q12894 506 aaPredicted RBP14.42□□□□□ -0.1
USF1-202ENST00000368020 SEMA3BQ13214 749 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 GALNTL6Q49A17 601 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 TIGD5Q53EQ6 642 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 FAXCQ5TGI0 409 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 SYPL2Q5VXT5 272 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 UNC5AQ6ZN44 842 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 PACS2Q86VP3 889 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 PPM1NQ8N819 430 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 CCDC63Q8NA47 563 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 ZNF75CPQ92670 426 aaPredicted RBP14.42□□□□□ -0.1
USF1-202ENST00000368020 LPPQ93052 612 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 TTC17Q96AE7 1141 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 STAMBPL1Q96FJ0 436 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 P2RY11Q96G91 374 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 WDR6Q9NNW5 1121 aaKnown RBP14.42□□□□□ -0.1
USF1-202ENST00000368020 DDIT4Q9NX09 232 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 TRHDEQ9UKU6 1024 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 ATP11BQ9Y2G3 1177 aa14.42□□□□□ -0.1
USF1-202ENST00000368020 ZNF638Q14966 1978 aaKnown RBP14.42□□□□□ -0.1
USF1-202ENST00000368020 YJEFN3A6XGL0 299 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 HHLA1C9JL84 531 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 E7ENQ6 273 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 COPEO14579 308 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 RASSF9O75901 435 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 B3GAT3O94766 335 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 ALDH1A2O94788 518 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 MAP3K6O95382 1288 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 C1QAP02745 245 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 DHRS4L1P0CG22 281 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 PGAM1P18669 254 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 CD52P31358 61 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 CXCR3P49682 368 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 NEK3P51956 506 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 COG7P83436 770 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 MBTPS1Q14703 1052 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 DBN1Q16643 649 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 ITPRIPL1Q6GPH6 555 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 DCLRE1AQ6PJP8 1040 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 C4orf50Q6ZRC1 276 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 DENND5BQ6ZUT9 1274 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 ZNF534Q76KX8 674 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 CCNYQ8ND76 341 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 C3orf58Q8NDZ4 430 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 ZMIZ2Q8NF64 920 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 RAB3IL1Q8TBN0 382 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 MYLPFQ96A32 169 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 COLEC11Q9BWP8 271 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 WDCPQ9H6R7 721 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 ABCF3Q9NUQ8 709 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 MIOSQ9NXC5 875 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.41□□□□□ -0.1
USF1-202ENST00000368020 MYO18AQ92614 2054 aaKnown RBP14.41□□□□□ -0.1
USF1-202ENST00000368020 NRP1O14786 923 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 KLF11O14901 512 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 EOMESO95936 686 aa14.41□□□□□ -0.1
USF1-202ENST00000368020 FYNP06241 537 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms