RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ZNF280AP59817 542 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 NCALDP61601 193 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 USP10Q14694 798 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 PSTKQ8IV42 348 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 EMC1Q8N766 993 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 PARK7Q99497 189 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CPNE1Q99829 537 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TEX12Q9BXU0 123 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 MRPL1Q9BYD6 325 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CDT1Q9H211 546 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 LRRC4CQ9HCJ2 640 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 SNCAIPQ9Y6H5 919 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 NAV1Q8NEY1 1877 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 BCLAF3A2AJT9 711 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 SPDYE16A6NNV3 312 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 USP1O94782 785 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 FARP2O94887 1054 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TPSB2P20231 275 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 STX5Q13190 355 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TPSAB1Q15661 275 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 LY6KQ17RY6 165 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 AAGABQ6PD74 315 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 PLEKHM3Q6ZWE6 761 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 EFL1Q7Z2Z2 1120 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TCAIMQ8N3R3 496 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 RIN3Q8TB24 985 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 HTR3CQ8WXA8 447 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 PRCCQ92733 491 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 IFT43Q96FT9 208 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 KLF6Q99612 283 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 C20orf96Q9NUD7 363 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 FAM8A1Q9UBU6 413 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CDYLQ9Y232 598 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ANKRD6Q9Y2G4 727 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 DOCK2Q92608 1830 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 FAM58BPP0C7Q3 252 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ZSCAN5DPP0CG00 497 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 RARBP10826 455 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 RALBP11234 206 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 NOS2P35228 1153 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CBX3Q13185 183 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 KRT72Q14CN4 511 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 INSCQ1MX18 579 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 NOL9Q5SY16 702 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 MROH9Q5TGP6 573 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 RWDD4Q6NW29 188 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 NET1Q7Z628 596 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 IKZF4Q9H2S9 585 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TASP1Q9H6P5 420 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 WDCPQ9H6R7 721 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ACP6Q9NPH0 428 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 COMMD3-BMI1R4GMX3 469 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CCDC88AQ3V6T2 1871 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 C1orf232A0A0U1RR37 186 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 HNRNPRO43390 633 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 ENO3P13929 434 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 DCAF6Q58WW2 860 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 FBXO47Q5MNV8 452 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 LBX2Q6XYB7 198 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 ACOT1Q86TX2 421 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 C19orf60Q96EN9 201 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 OXNAD1Q96HP4 312 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 ZNF317Q96PQ6 595 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 DEPDC7Q96QD5 511 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 ASPSCR1Q9BZE9 553 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 M0QYT0 321 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 ATG7O95352 703 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 CCNHP51946 323 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 ATXN3P54252 364 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 FAAP100Q0VG06 881 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 SH3D19Q5HYK7 790 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 RNASEH2BQ5TBB1 312 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 ZNF668Q96K58 619 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 SOX13Q9UN79 622 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 GLI3P10071 1580 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 ITGB4P16144 1822 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 PDZK1P1A8MUH7 402 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 BCL10O95999 233 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 CPA3P15088 417 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 CDKN2BP42772 138 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 CHSY1Q86X52 802 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 DDX1Q92499 740 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 EZH1Q92800 747 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 PHF21AQ96BD5 680 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 KLRG1Q96E93 195 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 TMEM245Q9H330 911 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 NRDE2Q9H7Z3 1164 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 NR2E1Q9Y466 385 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 IDH3BO43837 385 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 BGNP21810 368 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 CDH5P33151 784 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 RGS2P41220 211 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 RAP1GAPP47736 663 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 CDK18Q07002 472 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 PPIL2Q13356 520 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 GSTA3Q16772 222 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 LCLAT1Q6UWP7 414 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 C4orf50Q6ZRC1 276 aa5.49□□□□□ -1.53
CDC42BPA-204ENST00000366767 XYLT1Q86Y38 959 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms