RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 NUMA1Q14980 2115 aa12.94□□□□□ -0.34
MRPL55-209ENST00000366735 COL5A1P20908 1838 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-209ENST00000366735 MAP3K7O43318 606 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 ATP5BP06576 529 aaKnown RBP12.93□□□□□ -0.34
MRPL55-209ENST00000366735 SETSIPP0DME0 302 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 PRKCHP24723 683 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 COPAP53621 1224 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 RAD23BP54727 409 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 FAM193AP78312 1265 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 ZBTB16Q05516 673 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 SFSWAPQ12872 951 aaKnown RBP12.93□□□□□ -0.34
MRPL55-209ENST00000366735 GOLGA7BQ2TAP0 167 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 TCERG1LQ5VWI1 586 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 CACUL1Q86Y37 369 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 FMNL3Q8IVF7 1028 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 GOLGA1Q92805 767 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 CAMK1GQ96NX5 476 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-209ENST00000366735 ULBP1Q9BZM6 244 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 HSD3B7Q9H2F3 369 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 CCDC86Q9H6F5 360 aaKnown RBP12.93□□□□□ -0.34
MRPL55-209ENST00000366735 ABCC13Q9NSE7 274 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 RWDD2AQ9UIY3 292 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 PCOLCE2Q9UKZ9 415 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 MAPK8IP1Q9UQF2 711 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 PCDHGB2Q9Y5G2 931 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 CACNA1GO43497 2377 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 AKAP13Q12802 2813 aa12.93□□□□□ -0.34
MRPL55-209ENST00000366735 KCNJ18B7U540 433 aa12.92□□□□□ -0.34
MRPL55-209ENST00000366735 ADCY5O95622 1261 aa12.92□□□□□ -0.34
MRPL55-209ENST00000366735 DNTTP04053 509 aa12.92□□□□□ -0.34
MRPL55-209ENST00000366735 TBXAS1P24557 533 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-209ENST00000366735 HOXD9P28356 352 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-209ENST00000366735 RING1Q06587 406 aa12.92□□□□□ -0.34
MRPL55-209ENST00000366735 CAMK2GQ13555 558 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-209ENST00000366735 STIM1Q13586 685 aa12.92□□□□□ -0.34
MRPL55-209ENST00000366735 TRIP4Q15650 581 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-209ENST00000366735 DCAF17Q5H9S7 520 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-209ENST00000366735 PM20D1Q6GTS8 502 aa12.92□□□□□ -0.34
MRPL55-209ENST00000366735 CCDC117Q8IWD4 279 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-209ENST00000366735 DHTKD1Q96HY7 919 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-209ENST00000366735 MED15Q96RN5 788 aa12.92□□□□□ -0.34
MRPL55-209ENST00000366735 BTBD1Q9H0C5 482 aa12.92□□□□□ -0.34
MRPL55-209ENST00000366735 KIAA1522Q9P206 1035 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-209ENST00000366735 EIF2B4Q9UI10 523 aaKnown RBP12.92□□□□□ -0.34
MRPL55-209ENST00000366735 TSPAN16Q9UKR8 245 aa12.92□□□□□ -0.34
MRPL55-209ENST00000366735 SPEGQ15772 3267 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 SLC16A3O15427 465 aaKnown RBP12.91□□□□□ -0.34
MRPL55-209ENST00000366735 IRAK2O43187 625 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 CD19P15391 556 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 ZNF18P17022 549 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 POLR2EP19388 210 aaKnown RBP12.91□□□□□ -0.34
MRPL55-209ENST00000366735 PRCPP42785 496 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 GRIA4P48058 902 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 SLC11A2P49281 568 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 ST8SIA6P61647 398 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 ADIGQ0VDE8 80 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 SCAPQ12770 1279 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 HLA-BQ31612 363 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 ZCWPW2Q504Y3 356 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 ADGRF1Q5T601 910 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 NUGGCQ68CJ6 796 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 FOXR2Q6PJQ5 311 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 CHST9Q7L1S5 443 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 ADAT2Q7Z6V5 191 aaKnown RBP12.91□□□□□ -0.34
MRPL55-209ENST00000366735 FAM124AQ86V42 546 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 UNC45BQ8IWX7 931 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 SCML4Q8N228 414 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 GALNT15Q8N3T1 639 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 SEMA4DQ92854 862 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 TMA16Q96EY4 203 aaKnown RBP12.91□□□□□ -0.34
MRPL55-209ENST00000366735 EPAS1Q99814 870 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 DDX50Q9BQ39 737 aaKnown RBP12.91□□□□□ -0.34
MRPL55-209ENST00000366735 OCEL1Q9H607 264 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 SGK2Q9HBY8 427 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 OSGEPQ9NPF4 335 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 CNGB3Q9NQW8 809 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 SUN2Q9UH99 717 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 GGA2Q9UJY4 613 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 STOML2Q9UJZ1 356 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 KIAA1257Q9ULG3 409 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 SCML1Q9UN30 329 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 NCKAP1Q9Y2A7 1128 aa12.91□□□□□ -0.34
MRPL55-209ENST00000366735 PKD1L2Q7Z442 2459 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 PSMA7O14818 248 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 RNASEH1O60930 286 aaKnown RBP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 CBFA2T3O75081 653 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 SEMA4FO95754 770 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 DLDP09622 509 aaKnown RBP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 VDRP11473 427 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 PABPC1P11940 636 aaKnown RBP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 CDC25BP30305 580 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 CCT8P50990 548 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 ZNF75DP51815 510 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 MCCD1P59942 119 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-209ENST00000366735 PAK1Q13153 545 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 CUL2Q13617 745 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 ACAP1Q15027 740 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 STILQ15468 1287 aa12.9□□□□□ -0.34
MRPL55-209ENST00000366735 MPP7Q5T2T1 576 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms