RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 MYOCDQ8IZQ8 938 aa8.53□□□□□ -1.04
YBX3-204ENST00000366290 METTL13Q8N6R0 699 aa8.53□□□□□ -1.04
YBX3-204ENST00000366290 UHRF1Q96T88 793 aaPredicted RBP8.53□□□□□ -1.04
YBX3-204ENST00000366290 ERVK-5Q9HDB9 667 aa8.53□□□□□ -1.04
YBX3-204ENST00000366290 WRAP73Q9P2S5 460 aaPredicted RBP8.53□□□□□ -1.04
YBX3-204ENST00000366290 PCDHA12Q9UN75 941 aa8.53□□□□□ -1.04
YBX3-204ENST00000366290 MTCH2Q9Y6C9 303 aa8.53□□□□□ -1.04
YBX3-204ENST00000366290 MORC2Q9Y6X9 1032 aaPredicted RBP8.53□□□□□ -1.04
YBX3-204ENST00000366290 COL4A4P53420 1690 aaPredicted RBP8.53□□□□□ -1.04
YBX3-204ENST00000366290 FNDC1Q4ZHG4 1894 aaPredicted RBP8.52□□□□□ -1.05
YBX3-204ENST00000366290 ARHGAP6O43182 974 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 LINC00271P0C7V0 271 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 PRPHP41219 470 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 GPC3P51654 580 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 BPIFB4P59827 614 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 CEBPZQ03701 1054 aaKnown RBP8.52□□□□□ -1.05
YBX3-204ENST00000366290 HGFACQ04756 655 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 ZNF568Q3ZCX4 644 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 Q6ZVL8 140 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 FAM228AQ86W67 206 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 LINC00301Q8NCQ3 95 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 NEK9Q8TD19 979 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 ZNF480Q8WV37 535 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 ZNF689Q96CS4 500 aaPredicted RBP8.52□□□□□ -1.05
YBX3-204ENST00000366290 SAMD11Q96NU1 681 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 TGS1Q96RS0 853 aaKnown RBP8.52□□□□□ -1.05
YBX3-204ENST00000366290 MAP7D2Q96T17 732 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 LXNQ9BS40 222 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 SLC6A15Q9H2J7 730 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 TTC12Q9H892 705 aaPredicted RBP8.52□□□□□ -1.05
YBX3-204ENST00000366290 CHMP5Q9NZZ3 219 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 ST3GAL5Q9UNP4 418 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 PCDHA13Q9Y5I0 950 aa8.52□□□□□ -1.05
YBX3-204ENST00000366290 ADAMTS20P59510 1910 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 C5orf67F2Z3F1 127 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 LAD1O00515 517 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 MTSS1O43312 755 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 NOBOXO60393 691 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 RPS6KA5O75582 802 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 ENDOD1O94919 500 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 SLITRK3O94933 977 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 VTNP04004 478 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 XRCC6P12956 609 aaKnown RBP eCLIP8.51□□□□□ -1.05
YBX3-204ENST00000366290 DARSP14868 501 aaKnown RBP8.51□□□□□ -1.05
YBX3-204ENST00000366290 MARCKSP29966 332 aaPredicted RBP8.51□□□□□ -1.05
YBX3-204ENST00000366290 YWHABP31946 246 aaKnown RBP8.51□□□□□ -1.05
YBX3-204ENST00000366290 TECP42680 631 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 KCNC1P48547 511 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 CLCN3P51790 818 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 NLRP11P59045 1033 aaKnown RBP8.51□□□□□ -1.05
YBX3-204ENST00000366290 FAM189BP81408 668 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 NFYCQ13952 458 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 ACAP1Q15027 740 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 SLC39A14Q15043 492 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 RNF151Q2KHN1 245 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 PGS1Q32NB8 556 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 ARL6IP4Q66PJ3 421 aaKnown RBP8.51□□□□□ -1.05
YBX3-204ENST00000366290 SLC24A5Q71RS6 500 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 ZNF410Q86VK4 478 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 LRRC71Q8N4P6 559 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 KAT5Q92993 513 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 YME1L1Q96TA2 773 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 JPH2Q9BR39 696 aaPredicted RBP8.51□□□□□ -1.05
YBX3-204ENST00000366290 MMTAG2Q9BU76 263 aaKnown RBP8.51□□□□□ -1.05
YBX3-204ENST00000366290 DHX33Q9H6R0 707 aaKnown RBP8.51□□□□□ -1.05
YBX3-204ENST00000366290 CERS4Q9HA82 394 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 RGS18Q9NS28 235 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 C1orf112Q9NSG2 853 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 FBXO2Q9UK22 296 aaPredicted RBP8.51□□□□□ -1.05
YBX3-204ENST00000366290 NR2E1Q9Y466 385 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 ADGRA3Q8IWK6 1321 aa8.51□□□□□ -1.05
YBX3-204ENST00000366290 KIAA1671Q9BY89 1806 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 TMEM150BA6NC51 233 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 PP2D1A8MPX8 630 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 MGEA5O60502 916 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 B4GALT3O60512 393 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 YEATS4O95619 227 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 BMP15O95972 392 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 JUNP05412 331 aaKnown RBP8.5□□□□□ -1.05
YBX3-204ENST00000366290 VSIG10L2P0DP72 767 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 SLC6A9P48067 706 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 DRP2Q13474 957 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 GBX1Q14549 363 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 ATL3Q6DD88 541 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 NCAPH2Q6IBW4 605 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 OTUD6AQ7L8S5 288 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 TRMT1LQ7Z2T5 733 aaKnown RBP8.5□□□□□ -1.05
YBX3-204ENST00000366290 ANKRD53Q8N9V6 530 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 ARNTL2Q8WYA1 636 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 C1GALT1C1Q96EU7 318 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 ZNF396Q96N95 335 aaPredicted RBP8.5□□□□□ -1.05
YBX3-204ENST00000366290 ACO2Q99798 780 aaKnown RBP8.5□□□□□ -1.05
YBX3-204ENST00000366290 EIF2AK1Q9BQI3 630 aaKnown RBP8.5□□□□□ -1.05
YBX3-204ENST00000366290 POLR3CQ9BUI4 534 aaPredicted RBP8.5□□□□□ -1.05
YBX3-204ENST00000366290 EPHX3Q9H6B9 360 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 ELAC1Q9H777 363 aaKnown RBP8.5□□□□□ -1.05
YBX3-204ENST00000366290 BCO1Q9HAY6 547 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 CHST12Q9NRB3 414 aa8.5□□□□□ -1.05
YBX3-204ENST00000366290 ANKEF1Q9NU02 776 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms