RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 FUZQ9BT04 418 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 PHF7Q9BWX1 381 aaPredicted RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 TAOK3Q9H2K8 898 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 PRDM13Q9H4Q3 707 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 ACAD9Q9H845 621 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 SLC22A11Q9NSA0 550 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 IRAK4Q9NWZ3 460 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 FOXJ2Q9P0K8 574 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 CD207Q9UJ71 328 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 HSF4Q9ULV5 492 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 VPS4AQ9UN37 437 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 ARHGAP26Q9UNA1 814 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 GDAQ9Y2T3 454 aa4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 REXO2Q9Y3B8 237 aaKnown RBP4.16□□□□□ -1.74
RNU6-28P-201ENST00000362378 GRID2IPA4D2P6 1211 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 GRM8O00222 908 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 ORC4O43929 436 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 GUCY1B2O75343 617 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 TULP3O75386 442 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 PDE8BO95263 885 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 EBLN1P0CF75 366 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 ATF7P17544 494 aaPredicted RBP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 MAKP20794 623 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 CXCR5P32302 372 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 AGTR2P50052 363 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 CCT8P50990 548 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 CCT4P50991 539 aaKnown RBP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 CDK18Q07002 472 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 FOXI1Q12951 378 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 GAB1Q13480 694 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 ERCC6LQ2NKX8 1250 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 PRICKLE4Q2TBC4 344 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 PCID2Q5JVF3 399 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC39A5Q6ZMH5 540 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF804AQ7Z570 1209 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 BCDIN3DQ7Z5W3 292 aaKnown RBP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 NME8Q8N427 588 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 LSM14AQ8ND56 463 aaKnown RBP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 BEND2Q8NDZ0 799 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 SRFBP1Q8NEF9 429 aaKnown RBP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 SH3RF3Q8TEJ3 882 aaPredicted RBP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 TBC1D22AQ8WUA7 517 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC9A6Q92581 669 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 AKAP1Q92667 903 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 CENPIQ92674 756 aaPredicted RBP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZBTB10Q96DT7 871 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 HTATIP2Q9BUP3 242 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 STN1Q9H668 368 aaKnown RBP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 IL21RQ9HBE5 538 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 CYP4F11Q9HBI6 524 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 TBC1D22BQ9NU19 505 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 BLOC1S4Q9NUP1 217 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 MTMR4Q9NYA4 1195 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 LRIT1Q9P2V4 623 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 FBXO2Q9UK22 296 aaPredicted RBP4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 ENTPD2Q9Y5L3 495 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 SALL3Q9BXA9 1300 aa4.15□□□□□ -1.75
RNU6-28P-201ENST00000362378 TTC34A8MYJ7 566 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 PEX12O00623 359 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF213O14771 459 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 ANP32CO43423 234 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 MT-CO3P00414 261 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 DRD4P21917 467 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 ABCD3P28288 659 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC8A1P32418 973 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 COPB1P53618 953 aaKnown RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 WDR5P61964 334 aaKnown RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 GALNT2Q10471 571 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 FOXD4Q12950 439 aaPredicted RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 CAMK1Q14012 370 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF169Q14929 603 aaPredicted RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 GPR68Q15743 365 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 CNGA3Q16281 694 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 GPR162Q16538 588 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 LAIR1Q6GTX8 287 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 C4orf50Q6ZRC1 276 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 ARMC8Q8IUR7 673 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 ENDOVQ8N8Q3 282 aaKnown RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 TERB1Q8NA31 727 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 TDRD7Q8NHU6 1098 aaKnown RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 MAFAQ8NHW3 353 aaPredicted RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 CAVIN3Q969G5 261 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 SH3KBP1Q96B97 665 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 APOPT1Q96IL0 206 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF845Q96IR2 970 aaPredicted RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 BBC3Q96PG8 261 aaPredicted RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 MMS19Q96T76 1030 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 ADGRE3Q9BY15 652 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 CIPCQ9C0C6 399 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 CLPBQ9H078 707 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 MMRN2Q9H8L6 949 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 SFXN1Q9H9B4 322 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 OLA1Q9NTK5 396 aaKnown RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 THAP1Q9NVV9 213 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 ASIC5Q9NY37 505 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 AASSQ9UDR5 926 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 CNOT7Q9UIV1 285 aaKnown RBP4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 SUFUQ9UMX1 484 aa4.14□□□□□ -1.75
RNU6-28P-201ENST00000362378 B3GNT3Q9Y2A9 372 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms