RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CLDN5O00501 218 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 PPP1R11O60927 126 aaPredicted RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 PECAM1P16284 738 aaPredicted RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 POM121L1PQ3SYA9 428 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 PREPLQ4J6C6 727 aaPredicted RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 LBX2Q6XYB7 198 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 LENG9Q96B70 501 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 KATNA1O75449 491 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 FAM107AO95990 144 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 DARSP14868 501 aaKnown RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 ECM1Q16610 540 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 ZFYVE19Q96K21 471 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 WDR41Q9HAD4 459 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 SLC24A3Q9HC58 644 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 DNALI1O14645 258 aaPredicted RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 KLRC4O43908 158 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 CPSF4O95639 269 aaKnown RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 ADH1AP07327 375 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 SPATA31D3P0C874 917 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 CNTFP26441 200 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 SSTR1P30872 391 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 CENPAP49450 140 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 STX5Q13190 355 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 TRIP10Q15642 601 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 SPATA31D4Q6ZUB0 917 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 C12orf29Q8N999 325 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 NCKIPSDQ9NZQ3 722 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 HSPA1AP0DMV8 641 aaKnown RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 HSPA1BP0DMV9 641 aaKnown RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 CCDC85BQ15834 202 aaPredicted RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 SEL1L3Q68CR1 1132 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 FAR2Q96K12 515 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 HTATIP2Q9BUP3 242 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 POLR1EQ9GZS1 481 aaKnown RBP19■□□□□ 0.63
CLIP2-202ENST00000361545 SIK3Q9Y2K2 1263 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 C2CD2Q9Y426 696 aa19■□□□□ 0.63
CLIP2-202ENST00000361545 TMED1Q13445 227 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 MED21Q13503 144 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 SPRYD7Q5W111 196 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 C18orf25Q96B23 403 aaPredicted RBP18.99■□□□□ 0.63
CLIP2-202ENST00000361545 INPP4AQ96PE3 977 aaPredicted RBP18.99■□□□□ 0.63
CLIP2-202ENST00000361545 L2HGDHQ9H9P8 463 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 H2AFY2Q9P0M6 372 aaPredicted RBP18.99■□□□□ 0.63
CLIP2-202ENST00000361545 TPBGLP0DKB5 382 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 KDELR1P24390 212 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 CCNG1P51959 295 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 ACAP1Q15027 740 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 HNRNPLLQ8WVV9 542 aaKnown RBP18.99■□□□□ 0.63
CLIP2-202ENST00000361545 INPP5DQ92835 1189 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 RAD18Q9NS91 495 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 MOXD2PA6NHM9 499 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 MAMLD1Q13495 774 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 C10orf53Q8N6V4 93 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 GIT1Q9Y2X7 761 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 CYP2A6P11509 494 aaPredicted RBP18.99■□□□□ 0.63
CLIP2-202ENST00000361545 BGNP21810 368 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 TARSP26639 723 aaKnown RBP18.99■□□□□ 0.63
CLIP2-202ENST00000361545 RPL21P46778 160 aaKnown RBP18.99■□□□□ 0.63
CLIP2-202ENST00000361545 TCEA2Q15560 299 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 TJAP1Q5JTD0 557 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 LRRC55Q6ZSA7 311 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 ZBTB10Q96DT7 871 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 C2orf49Q9BVC5 232 aaPredicted RBP18.99■□□□□ 0.63
CLIP2-202ENST00000361545 PRKD2Q9BZL6 878 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 ZCCHC2Q9C0B9 1178 aaKnown RBP18.99■□□□□ 0.63
CLIP2-202ENST00000361545 SIGLEC16A6NMB1 481 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 APOC4-APOC2K7ER74 178 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 AGRPO00253 132 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 APOC2P02655 101 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 MAPK1P28482 360 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 CAPZA2P47755 286 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 PWP1Q13610 501 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 WDR93Q6P2C0 686 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 DCLRE1AQ6PJP8 1040 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 USP6NLQ92738 828 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 TLR10Q9BXR5 811 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 CHST7Q9NS84 486 aa18.99■□□□□ 0.63
CLIP2-202ENST00000361545 MRC1P22897 1456 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 CSH1P0DML2 217 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 CSH2P0DML3 217 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 PGAM1P18669 254 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 SERPINA4P29622 427 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 AQP5P55064 265 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 MAP3K10Q02779 954 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 EIF2B5Q13144 721 aaKnown RBP18.98■□□□□ 0.63
CLIP2-202ENST00000361545 CYP51A1Q16850 503 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 SETMARQ53H47 684 aaPredicted RBP18.98■□□□□ 0.63
CLIP2-202ENST00000361545 NPNTQ6UXI9 565 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 ABHD15Q6UXT9 468 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 LENG1Q96BZ8 264 aaPredicted RBP18.98■□□□□ 0.63
CLIP2-202ENST00000361545 MAN1C1Q9NR34 630 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 CCNE2O96020 404 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 RPL9P32969 192 aaKnown RBP18.98■□□□□ 0.63
CLIP2-202ENST00000361545 NPY2RP49146 381 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 GRIK3Q13003 919 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 AADACL2Q6P093 401 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 CNDP1Q96KN2 507 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 HSFY1Q96LI6 401 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 PTPRHQ9HD43 1115 aa18.98■□□□□ 0.63
CLIP2-202ENST00000361545 SLC24A2Q9UI40 661 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms