RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 OCM2P0CE71 109 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 OCMP0CE72 109 aaPredicted RBP13.78□□□□□ -0.2
LDB3-202ENST00000361373 WEE1P30291 646 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 CD52P31358 61 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 CDK7P50613 346 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 POLE2P56282 527 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 NCALDP61601 193 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 SUSD6Q92537 303 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 ASB2Q96Q27 587 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 POLG2Q9UHN1 485 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 VPS51Q9UID3 782 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 ZNF839A8K0R7 811 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 OPLAHO14841 1288 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 TSPAN3O60637 253 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 DDHD2O94830 711 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 H2AFXP16104 143 aaPredicted RBP13.78□□□□□ -0.2
LDB3-202ENST00000361373 MAD2L1Q13257 205 aaPredicted RBP13.78□□□□□ -0.2
LDB3-202ENST00000361373 ITGA7Q13683 1181 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 DDX39BQ13838 428 aaKnown RBP13.78□□□□□ -0.2
LDB3-202ENST00000361373 CASP10Q92851 521 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 ACTR8Q9H981 624 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 F8W810 466 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 FGF19O95750 216 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 PRKAA1Q13131 559 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 CSHL1Q14406 222 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 USP45Q70EL2 814 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 OTOAQ7RTW8 1153 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 ZNF438Q7Z4V0 828 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 SPPL2BQ8TCT7 592 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 MCOLN3Q8TDD5 553 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 CAMKK2Q96RR4 588 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 IL22Q9GZX6 179 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 UBP1Q9NZI7 540 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 DTNAQ9Y4J8 743 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 NCANO14594 1321 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 ZNF541Q9H0D2 1346 aa13.78□□□□□ -0.2
LDB3-202ENST00000361373 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.77□□□□□ -0.2
LDB3-202ENST00000361373 TSHRP16473 764 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 CES1P23141 567 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 HNRNPH3P31942 346 aaKnown RBP13.77□□□□□ -0.2
LDB3-202ENST00000361373 GRK4P32298 578 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 PURBQ96QR8 312 aaKnown RBP13.77□□□□□ -0.2
LDB3-202ENST00000361373 SIKE1Q9BRV8 207 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 ZNF670Q9BS34 389 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 CASZ1Q86V15 1759 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 A0A0A0MRY4 1105 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 LOC100653049A0A140TA62 436 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 TMEM114B3SHH9 223 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 F8VP50 259 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 CAND2O75155 1236 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 KRT34O76011 436 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 ARF4P18085 180 aaPredicted RBP13.77□□□□□ -0.2
LDB3-202ENST00000361373 HDCP19113 662 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 MIIPQ5JXC2 388 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 CCDC33Q8N5R6 958 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 TADA1Q96BN2 335 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 SPATA13Q96N96 652 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 RNPEPQ9H4A4 650 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 DNAJC18Q9H819 358 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 VTI1BQ9UEU0 232 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 DNPEPQ9ULA0 475 aa13.77□□□□□ -0.2
LDB3-202ENST00000361373 MGAT4DA6NG13 374 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 KCNK1O00180 336 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 CHADO15335 359 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 RIPK2O43353 540 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 IFNA14P01570 189 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 CCND1P24385 295 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 GLT6D1Q7Z4J2 308 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 HORMAD1Q86X24 394 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 LRRC34Q8IZ02 419 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 ADAM32Q8TC27 787 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 THUMPD3Q9BV44 507 aaKnown RBP13.77□□□□□ -0.21
LDB3-202ENST00000361373 COL14A1Q05707 1796 aaKnown RBP13.77□□□□□ -0.21
LDB3-202ENST00000361373 PECAM1P16284 738 aaPredicted RBP13.77□□□□□ -0.21
LDB3-202ENST00000361373 SNRPD1P62314 119 aaKnown RBP13.77□□□□□ -0.21
LDB3-202ENST00000361373 IL17AQ16552 155 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 ZCCHC9Q8N567 271 aaKnown RBP13.77□□□□□ -0.21
LDB3-202ENST00000361373 C4orf32Q8N8J7 132 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 TSEN34Q9BSV6 310 aaKnown RBP13.77□□□□□ -0.21
LDB3-202ENST00000361373 STARD13Q9Y3M8 1113 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 FLOT2Q14254 428 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 NR1H4Q96RI1 486 aaPredicted RBP13.77□□□□□ -0.21
LDB3-202ENST00000361373 RGS18Q9NS28 235 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 KCND1Q9NSA2 647 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 ZNF510Q9Y2H8 683 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 HES2Q9Y543 173 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 PCDHA2Q9Y5H9 948 aa13.77□□□□□ -0.21
LDB3-202ENST00000361373 XPO1O14980 1071 aaKnown RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 EPB42P16452 691 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 CTNNB1P35222 781 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 SERPINH1P50454 418 aaKnown RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 SEC24CP53992 1094 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 NAA20P61599 178 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 ENPEPQ07075 957 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 DPYSL3Q14195 570 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 PSMD5Q16401 504 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 BRMS1LQ5PSV4 323 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 EEF1DP3Q658K8 133 aa13.76□□□□□ -0.21
LDB3-202ENST00000361373 PSTKQ8IV42 348 aaKnown RBP13.76□□□□□ -0.21
LDB3-202ENST00000361373 KAT5Q92993 513 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms