RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 DHX34Q14147 1143 aaKnown RBP17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 NAA30Q147X3 362 aaPredicted RBP17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 CYP1B1Q16678 543 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 LRIT3Q3SXY7 679 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 GLE1Q53GS7 698 aaKnown RBP17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 MS4A13Q5J8X5 152 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 ACBD5Q5T8D3 534 aaPredicted RBP17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 NCBP2-AS2Q69YL0 99 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 DARS2Q6PI48 645 aaKnown RBP17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 ZC3H18Q86VM9 953 aaKnown RBP17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 LGI2Q8N0V4 545 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 MICALL1Q8N3F8 863 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 PLD5Q8N7P1 536 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 VN1R2Q8NFZ6 395 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 C1orf74Q96LT6 269 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 RPRD1AQ96P16 312 aaPredicted RBP17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 DDX50Q9BQ39 737 aaKnown RBP17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 LRRC19Q9H756 370 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 MTCL1Q9Y4B5 1905 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 GOLGA6L7A0A1B0GV03 622 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 FGF10O15520 208 aaPredicted RBP17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 LINC01565O15544 149 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 TTI1O43156 1089 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 HEXIM1O94992 359 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 GAS8O95995 478 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 PFKLP17858 780 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 TACR2P21452 398 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 IGFBP4P22692 258 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 SERPINB6P35237 376 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 MLLT6P55198 1093 aaPredicted RBP17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 LMNB2Q03252 620 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 SEMA3BQ13214 749 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 AUHQ13825 339 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 DPYSQ14117 519 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 SLC5A9Q2M3M2 681 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 TTC27Q6P3X3 843 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 BZW1Q7L1Q6 419 aaKnown RBP17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 C14orf80Q86SX3 495 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 EFHBQ8N7U6 833 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 RSAD2Q8WXG1 361 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 SLC46A2Q9BY10 475 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 EPC1Q9H2F5 836 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 TASP1Q9H6P5 420 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 ETNK2Q9NVF9 386 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 FEZ2Q9UHY8 353 aaPredicted RBP17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 DNPEPQ9ULA0 475 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 MFHAS1Q9Y4C4 1052 aa17.13■□□□□ 0.33
SDCBP2-202ENST00000360779 SGK1O00141 431 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 MFSD11O43934 449 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 OLFM2O95897 454 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 CEBPBP17676 345 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 VCPP55072 806 aaKnown RBP17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 SLC7A9P82251 487 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 GBE1Q04446 702 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 NOMO1Q15155 1222 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 DDX42Q86XP3 938 aaKnown RBP eCLIP17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 CCDC33Q8N5R6 958 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 GPR161Q8N6U8 529 aaKnown RBP17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 ATL2Q8NHH9 583 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 HINFPQ9BQA5 517 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 ZYG11BQ9C0D3 744 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 SMG9Q9H0W8 520 aaKnown RBP17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 UTP11Q9Y3A2 253 aaKnown RBP17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 CHD9Q3L8U1 2897 aa17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 LAMA2P24043 3122 aaKnown RBP17.12■□□□□ 0.33
SDCBP2-202ENST00000360779 CTIFO43310 598 aaKnown RBP17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 RBP3P10745 1247 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 NR2C2P49116 596 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 NRG1Q02297 640 aaPredicted RBP17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 PRSS36Q5K4E3 855 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 RABGAP1LQ5R372 815 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 NADSYN1Q6IA69 706 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 ANKRD54Q6NXT1 300 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 FBXL22Q6P050 247 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 JAMLQ86YT9 394 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 CDKL3Q8IVW4 592 aaPredicted RBP17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 CMTM8Q8IZV2 173 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 FERMT1Q9BQL6 677 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 TRIM51Q9BSJ1 452 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 RAB17Q9H0T7 212 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 LMCD1Q9NZU5 365 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 MPP6Q9NZW5 540 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 PCYOX1Q9UHG3 505 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 AGO1Q9UL18 857 aaKnown RBP17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 TNRC18O15417 2968 aaPredicted RBP17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 ATG2AQ2TAZ0 1938 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 TMEM265A0A087WTH1 108 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 TYW5A2RUC4 315 aaKnown RBP17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 FAM187AA6NFU0 413 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 LEFTY2O00292 366 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 NRG2O14511 850 aaPredicted RBP17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 TRDMT1O14717 391 aaKnown RBP17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 DCLK1O15075 740 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 TSPAN3O60637 253 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 FSHRP23945 695 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 GUCY2DQ02846 1103 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 GRIN2CQ14957 1233 aa17.11■□□□□ 0.33
SDCBP2-202ENST00000360779 RFWD3Q6PCD5 774 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms