RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 GPR20Q99678 358 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 ASPSCR1Q9BZE9 553 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 ADNPQ9H2P0 1102 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 PCDH18Q9HCL0 1135 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 RRN3Q9NYV6 651 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 ADGRA3Q8IWK6 1321 aa16.73■□□□□ 0.27
SCAF1-201ENST00000360565 SLC12A8A0AV02 714 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 MPOP05164 745 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 RBP1P09455 135 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 BDNFP23560 247 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 IRX1P78414 480 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-201ENST00000360565 POU4F1Q01851 419 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 PTP4A2Q12974 167 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 XRCC4Q13426 336 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 FAM117BQ6P1L5 589 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 C1orf127Q8N9H9 656 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 CPT1BQ92523 772 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 UBXN6Q9BZV1 441 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 EFR3BQ9Y2G0 817 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 ATRNL1Q5VV63 1379 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 NPY2RP49146 381 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 PLK1P53350 603 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 NAGLUP54802 743 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 BEX3Q00994 111 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 FITM2Q8N6M3 262 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 ZNF398Q8TD17 642 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 JADE3Q92613 823 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 SMARCD1Q96GM5 515 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 CINPQ9BW66 212 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-201ENST00000360565 APOL5Q9BWW9 433 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 RUBCNLQ9H714 662 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 OR12D3Q9UGF7 316 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 NCF1BA6NI72 391 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-201ENST00000360565 NCF1CA8MVU1 366 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-201ENST00000360565 C2CD2LO14523 706 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 SOAT2O75908 522 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 NCF1P14598 390 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-201ENST00000360565 TSHRP16473 764 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 NPR3P17342 541 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 AXLP30530 894 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 TUBP50607 506 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 PLOD1Q02809 727 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-201ENST00000360565 UNC5AQ6ZN44 842 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 PKD2L2Q9NZM6 624 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 CD48P09326 243 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 RGS4P49798 205 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 PSEN2P49810 448 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 SNX17Q15036 470 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 NOMO1Q15155 1222 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 IQSEC1Q6DN90 963 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 IYDQ6PHW0 289 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 ANKRD27Q96NW4 1050 aa16.72■□□□□ 0.27
SCAF1-201ENST00000360565 NIFKQ9BYG3 293 aaKnown RBP16.72■□□□□ 0.27
SCAF1-201ENST00000360565 MAFBQ9Y5Q3 323 aaPredicted RBP16.72■□□□□ 0.27
SCAF1-201ENST00000360565 PRRG1O14668 218 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 XYLT1Q86Y38 959 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 THAP11Q96EK4 314 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 CERS2Q96G23 380 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 ELOVL4Q9GZR5 314 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 RIC8BQ9NVN3 520 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 ZMYM2Q9UBW7 1377 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 HIST1H2AGP0C0S8 130 aaPredicted RBP16.71■□□□□ 0.27
SCAF1-201ENST00000360565 HIST1H2ADP20671 130 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 CACNA2D1P54289 1103 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 NFE2Q16621 373 aaPredicted RBP16.71■□□□□ 0.27
SCAF1-201ENST00000360565 CYP1B1Q16678 543 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 PRAMEF19Q5SWL8 479 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 ANKRD22Q5VYY1 191 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 TAF2Q6P1X5 1199 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 SZRD1Q7Z422 152 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 SNX32Q86XE0 403 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 ECHDC2Q86YB7 292 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 PSTKQ8IV42 348 aaKnown RBP16.71■□□□□ 0.27
SCAF1-201ENST00000360565 B3GALNT2Q8NCR0 500 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 HIST1H2AHQ96KK5 128 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 HIST1H2AJQ99878 128 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 TINF2Q9BSI4 451 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 H2AFJQ9BTM1 129 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 KLHL4Q9C0H6 718 aa16.71■□□□□ 0.27
SCAF1-201ENST00000360565 DMAP1Q9NPF5 467 aaPredicted RBP16.71■□□□□ 0.27
SCAF1-201ENST00000360565 TRMT6Q9UJA5 497 aaKnown RBP16.71■□□□□ 0.27
SCAF1-201ENST00000360565 ZNF214Q9UL59 606 aaPredicted RBP16.71■□□□□ 0.27
SCAF1-201ENST00000360565 GPR25O00155 361 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 ENDOD1O94919 500 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 PIGNO95427 931 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 CDK7P50613 346 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 CSE1LP55060 971 aaKnown RBP16.71■□□□□ 0.26
SCAF1-201ENST00000360565 OCA2Q04671 838 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 CTXN3Q4LDR2 81 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 PLEKHO2Q8TD55 490 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF516Q92618 1163 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 RNF112Q9ULX5 631 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 MYH8P13535 1937 aa16.71■□□□□ 0.26
SCAF1-201ENST00000360565 UBDO15205 165 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 C16orf87Q6PH81 154 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.7■□□□□ 0.26
SCAF1-201ENST00000360565 MRPL45Q9BRJ2 306 aaKnown RBP16.7■□□□□ 0.26
SCAF1-201ENST00000360565 BRD8Q9H0E9 1235 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 DSEQ9UL01 958 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms