RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 VWCEQ96DN2 955 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 RUNDC3BQ96NL0 473 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 SEPT5Q99719 369 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 WDR83Q9BRX9 315 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 TKTL2Q9H0I9 626 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 FAM124BQ9H5Z6 455 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 RETREG1Q9H6L5 497 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 USP29Q9HBJ7 922 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 WDR6Q9NNW5 1121 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 MLXIPLQ9NP71 852 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 DMAP1Q9NPF5 467 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 UBN1Q9NPG3 1134 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 ARHGEF4Q9NR80 690 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 TMEM161AQ9NX61 479 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 DTLQ9NZJ0 730 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 LMCD1Q9NZU5 365 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 SPATA7Q9P0W8 599 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 TPX2Q9ULW0 747 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 VPS9D1Q9Y2B5 631 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 DOCK6Q96HP0 2047 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 ATXN2Q99700 1313 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 GOLGA8KD6RF30 607 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 KCNK1O00180 336 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 SCAMP3O14828 347 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 TIMM44O43615 452 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 KRT38O76015 456 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 METTL18O95568 372 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 RPLP2P05387 115 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 HMBSP08397 361 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 CPB1P15086 417 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 VAV1P15498 845 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 NR1D1P20393 614 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 NOS2P35228 1153 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 GRIA1P42261 906 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 MAGEA4P43358 317 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 DEFB103AP81534 67 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 FOXK1P85037 733 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 INSM1Q01101 510 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 LAMB3Q13751 1172 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 SLMAPQ14BN4 828 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 ARHGEF6Q15052 776 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 DPYSL2Q16555 572 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 BBS9Q3SYG4 887 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 RAB41Q5JT25 222 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 RNF19BQ6ZMZ0 732 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 SCD5Q86SK9 330 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 CYP4X1Q8N118 509 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 AGGF1Q8N302 714 aaeCLIP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 NPWQ8N729 165 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 EIF1ADQ8N9N8 165 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 CCNYQ8ND76 341 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 MAGEC3Q8TD91 643 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 AUTS2Q8WXX7 1259 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 SEPT8Q92599 483 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 CASP10Q92851 521 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 PAWRQ96IZ0 340 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 CELF6Q96J87 481 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 SLC2A13Q96QE2 648 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 PCDH9Q9HC56 1237 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 RAB6BQ9NRW1 208 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 ADAM28Q9UKQ2 775 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 OGDHLQ9ULD0 1010 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 MAGED2Q9UNF1 606 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 DRG1Q9Y295 367 aaKnown RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 USP3Q9Y6I4 520 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 MICAL3Q7RTP6 2002 aa5.25□□□□□ -1.57
ATXN3-202ENST00000359366 FNDC1Q4ZHG4 1894 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-202ENST00000359366 POC1B-GALNT4F8VUJ3 575 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 EEF2KO00418 725 aaKnown RBP5.24□□□□□ -1.57
ATXN3-202ENST00000359366 VNN2O95498 520 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 TTC4O95801 387 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 FESP07332 822 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 APRTP07741 180 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 F7P08709 466 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-202ENST00000359366 DNAJB2P25686 324 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 SSTR1P30872 391 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 ADRA1BP35368 520 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 ARL4AP40617 200 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 GNGT1P63211 74 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 CRADDP78560 199 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 AP1B1Q10567 949 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 DUSP4Q13115 394 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 TFDP2Q14188 446 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 PDK2Q15119 407 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 LRRC26Q2I0M4 334 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 MGAT5BQ3V5L5 792 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 SPOUT1Q5T280 376 aaKnown RBP5.24□□□□□ -1.57
ATXN3-202ENST00000359366 SLC9A4Q6AI14 798 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 RWDD4Q6NW29 188 aaKnown RBP5.24□□□□□ -1.57
ATXN3-202ENST00000359366 FUT10Q6P4F1 479 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 DRICH1Q6PGQ1 229 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-202ENST00000359366 LRRC31Q6UY01 552 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 DENND5BQ6ZUT9 1274 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 SYDE1Q6ZW31 735 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-202ENST00000359366 STRADAQ7RTN6 431 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 MIB1Q86YT6 1006 aa5.24□□□□□ -1.57
ATXN3-202ENST00000359366 APLFQ8IW19 511 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-202ENST00000359366 ZCCHC9Q8N567 271 aaKnown RBP5.24□□□□□ -1.57
ATXN3-202ENST00000359366 GBP7Q8N8V2 638 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-202ENST00000359366 MAB21L3Q8N8X9 362 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms