RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 RABGGTBP53611 331 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 SEPT7Q16181 437 aaKnown RBP15.34■□□□□ 0.05
GABPB1-202ENST00000359031 LGSNQ5TDP6 509 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 STEAP4Q687X5 459 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 LVRNQ6Q4G3 990 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 UNC5AQ6ZN44 842 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 CNPY4Q8N129 248 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 CCDC33Q8N5R6 958 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 GBP7Q8N8V2 638 aaPredicted RBP15.34■□□□□ 0.05
GABPB1-202ENST00000359031 COLGALT1Q8NBJ5 622 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 EPAS1Q99814 870 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 PITPNM3Q9BZ71 974 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 PRDM12Q9H4Q4 367 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 IGSF9Q9P2J2 1179 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 PRKAG3Q9UGI9 489 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 PCDHB8Q9UN66 801 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 STARD13Q9Y3M8 1113 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 PCDHA11Q9Y5I1 949 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 MYO16Q9Y6X6 1858 aa15.34■□□□□ 0.05
GABPB1-202ENST00000359031 MOXD2PA6NHM9 499 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 KRT37O76014 449 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 ERCC2P18074 760 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 BDNFP23560 247 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 CYP2C18P33260 490 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 SCTRP47872 440 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 SLC18A2Q05940 514 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 FAAP100Q0VG06 881 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 PARP6Q2NL67 630 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 TTC31Q49AM3 519 aaPredicted RBP15.33■□□□□ 0.04
GABPB1-202ENST00000359031 PAN2Q504Q3 1202 aaKnown RBP15.33■□□□□ 0.04
GABPB1-202ENST00000359031 RNF43Q68DV7 783 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 CGB2Q6NT52 195 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 LRRC8BQ6P9F7 803 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 CYS1Q717R9 158 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 PRPF39Q86UA1 669 aaKnown RBP15.33■□□□□ 0.04
GABPB1-202ENST00000359031 CCNJLQ8IV13 435 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 PPM1NQ8N819 430 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 OR10T2Q8NGX3 314 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 ADAM32Q8TC27 787 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 MTBPQ96DY7 904 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 STAMBPL1Q96FJ0 436 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 COLEC11Q9BWP8 271 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 RHOBTB2Q9BYZ6 727 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 PLAC1Q9HBJ0 212 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 RGS18Q9NS28 235 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 HAUS2Q9NVX0 235 aa15.33■□□□□ 0.04
GABPB1-202ENST00000359031 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.047e-6■■■■□ 20.5
GABPB1-202ENST00000359031 FAM159BA6NKW6 160 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 H0YHG0 523 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 MTSS1O43312 755 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 DNAJC8O75937 253 aaPredicted RBP15.32■□□□□ 0.04
GABPB1-202ENST00000359031 EOMESO95936 686 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 MX2P20592 715 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 SERPINB6P35237 376 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 NEK3P51956 506 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 PPIDQ08752 370 aaKnown RBP15.32■□□□□ 0.04
GABPB1-202ENST00000359031 WASHC5Q12768 1159 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 BSPRYQ5W0U4 402 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 GLB1LQ6UWU2 654 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 C4orf50Q6ZRC1 276 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 TAC4Q86UU9 113 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 CTAGE3PQ8IX95 158 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 CCNYQ8ND76 341 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 SLAIN1Q8ND83 568 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 TCP10LQ8TDR4 215 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 HASPINQ8TF76 798 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 NAT9Q9BTE0 207 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 WDCPQ9H6R7 721 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 ANLNQ9NQW6 1124 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 TMLHEQ9NVH6 421 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 MKS1Q9NXB0 559 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 GRID1Q9ULK0 1009 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 SLC12A4Q9UP95 1085 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 MAD1L1Q9Y6D9 718 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 PLXNA3P51805 1871 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 FAM72CH0Y354 149 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 TMEM189-UBE2V1I3L0A0 370 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 DNM1LO00429 736 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 LPXNO60711 386 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 EDF1O60869 148 aaKnown RBP15.32■□□□□ 0.04
GABPB1-202ENST00000359031 PIAS1O75925 651 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 IGLV3-25P01717 112 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 SNRPAP09012 282 aaKnown RBP15.32■□□□□ 0.04
GABPB1-202ENST00000359031 CKBP12277 381 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 IBSPP21815 317 aaPredicted RBP15.32■□□□□ 0.04
GABPB1-202ENST00000359031 SERPINB9P50453 376 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 IFRD2Q12894 506 aaPredicted RBP15.32■□□□□ 0.04
GABPB1-202ENST00000359031 DNAJC3Q13217 504 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 SPRED3Q2MJR0 410 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 FAM72AQ5TYM5 149 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 FAM72DQ6L9T8 149 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 FAM72BQ86X60 149 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 ZNF567Q8N184 647 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 MPP5Q8N3R9 675 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 URGCPQ8TCY9 931 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 EDEM1Q92611 657 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 HDAC11Q96DB2 347 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 GLT1D1Q96MS3 346 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 TSEN34Q9BSV6 310 aaKnown RBP15.32■□□□□ 0.04
GABPB1-202ENST00000359031 VPS11Q9H270 941 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms