RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 AP5M1Q9H0R1 490 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 STON1Q9Y6Q2 735 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 NCAM2O15394 837 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 SSNA1O43805 119 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 AKAP3O75969 853 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 PARNO95453 639 aaKnown RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 RARAP10276 462 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 COX4I1P13073 169 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 CRABP2P29373 138 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 STAT5AP42229 794 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 STAT5BP51692 787 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 TUBA1BP68363 451 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 PDCD4Q53EL6 469 aaKnown RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 TTC23Q5W5X9 447 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 TUBA1AQ71U36 451 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 DENND6AQ8IWF6 608 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 LRRC71Q8N4P6 559 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 SLC7A14Q8TBB6 771 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 POP5Q969H6 163 aaKnown RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 TUBGCP5Q96RT8 1024 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 FBXO6Q9NRD1 293 aaPredicted RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 RAD18Q9NS91 495 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 C3orf18Q9UK00 162 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 TRIP11Q15643 1979 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 PDGFRBP09619 1106 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 PRKAR1AP10644 381 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 FLT3P36888 993 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 GRB10Q13322 594 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 NSUN4Q96CB9 384 aaKnown RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 B3GALT6Q96L58 329 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 ERAP1Q9NZ08 941 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 CDH9Q9ULB4 789 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 DRG1Q9Y295 367 aaKnown RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 NWD1Q149M9 1564 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 CLUHO75153 1309 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 F5H6K3 240 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 SLC37A4O43826 429 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 SLC25A3Q00325 362 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 KLRC3Q07444 240 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 SCARA3Q6AZY7 606 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TUBA3EQ6PEY2 450 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TBC1D19Q8N5T2 526 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 MAB21L3Q8N8X9 362 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 KAT2BQ92831 832 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 RGS18Q9NS28 235 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 PCDHB8Q9UN66 801 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 NUP214P35658 2090 aaPredicted RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TEX28O15482 410 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 POU1F1P28069 291 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TRAP1Q12931 704 aaKnown RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 MAD2L1Q13257 205 aaPredicted RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 HLFQ16534 295 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 RNF149Q8NC42 400 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 ART4Q93070 314 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 RIBC2Q9H4K1 309 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 VPS45Q9NRW7 570 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 RAPGEFL1Q9UHV5 662 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 RGSL1A5PLK6 1076 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 DNM1LO00429 736 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 AKR1D1P51857 326 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 USP46P62068 366 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 PUDPQ08623 228 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 KLHL24Q6TFL4 600 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF276Q8N554 614 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 SLC5A5Q92911 643 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TEX13BQ9BXU2 312 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF335Q9H4Z2 1342 aaPredicted RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TMEM114B3SHH9 223 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 GSC2O15499 205 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 MOCS2O96007 188 aaPredicted RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 PRKCBP05771 671 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TGFBR2P37173 567 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 ALDH6A1Q02252 535 aaKnown RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 SPANXN3Q5MJ09 141 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 EMC1Q8N766 993 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 ASB2Q96Q27 587 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 FAM92AA1XBS5 289 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 CCNKO75909 580 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 CYP11B2P19099 503 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 GP5P40197 560 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 NEK3P51956 506 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 CSE1LP55060 971 aaKnown RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 ADAM17P78536 824 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TROAPQ12815 778 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 CACTIN-AS1Q8N1I8 211 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 RASSF5Q8WWW0 418 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 CENPIQ92674 756 aaPredicted RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 FAM120BQ96EK7 910 aaKnown RBP8.95□□□□□ -0.98
COL6A6-201ENST00000358511 KIFC1Q9BW19 673 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 EPB41L1Q9H4G0 881 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 DNAJC18Q9H819 358 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 ACAD9Q9H845 621 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 PCDH12Q9NPG4 1184 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 NCANO14594 1321 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 F8W810 466 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 RAP1GAPP47736 663 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 TNK2Q07912 1038 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 SPIDRQ14159 915 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 SQLEQ14534 574 aa8.95□□□□□ -0.98
COL6A6-201ENST00000358511 GOLGA7BQ2TAP0 167 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms