RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SPHK2Q9NRA0 654 aa15.76■□□□□ 0.11
TPM1-206ENST00000358278 KLHL11Q9NVR0 708 aa15.76■□□□□ 0.11
TPM1-206ENST00000358278 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.76■□□□□ 0.11
TPM1-206ENST00000358278 SNX10Q9Y5X0 201 aa15.76■□□□□ 0.11
TPM1-206ENST00000358278 F5P12259 2224 aa15.76■□□□□ 0.11
TPM1-206ENST00000358278 MUC3AQ02505 3323 aa15.76■□□□□ 0.11
TPM1-206ENST00000358278 CREB3O43889 395 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 SRGAP2O75044 1071 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 ADH1CP00326 375 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 MLLT6P55198 1093 aaPredicted RBP15.75■□□□□ 0.11
TPM1-206ENST00000358278 CA9Q16790 459 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 ANO4Q32M45 955 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 RABGAP1LQ5R372 815 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 LRRC38Q5VT99 294 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 NT5DC3Q86UY8 548 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 ADGRG2Q8IZP9 1017 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 C17orf53Q8N3J3 647 aaPredicted RBP15.75■□□□□ 0.11
TPM1-206ENST00000358278 CSGALNACT1Q8TDX6 532 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 DDI1Q8WTU0 396 aa15.75■□□□□ 0.11
TPM1-206ENST00000358278 RPRD1AQ96P16 312 aaPredicted RBP15.75■□□□□ 0.11
TPM1-206ENST00000358278 E9PAM4 449 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 CYP17A1P05093 508 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 MSNP26038 577 aaKnown RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 DEKP35659 375 aaKnown RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 NR1H3Q13133 447 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 RUNX3Q13761 415 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 KRT81Q14533 505 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 DHCR24Q15392 516 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 MPPE1Q53F39 396 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 LY6G5CQ5SRR4 150 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 RWDD4Q6NW29 188 aaKnown RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 FBXL22Q6P050 247 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 TMEM25Q86YD3 366 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 KCTD6Q8NC69 237 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 HJURPQ8NCD3 748 aaPredicted RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 TMA16Q96EY4 203 aaKnown RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 PRICKLE1Q96MT3 831 aaPredicted RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 KCTD15Q96SI1 283 aaPredicted RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 BBS2Q9BXC9 721 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 MAGEB5Q9BZ81 275 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 ECT2Q9H8V3 914 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 HPS4Q9NQG7 708 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 KCND1Q9NSA2 647 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 GTSE1Q9NYZ3 720 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 PACSIN2Q9UNF0 486 aaPredicted RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 CHD5Q8TDI0 1954 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 SHROOM3Q8TF72 1996 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 CCDC66A2RUB6 948 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 NEDD8-MDP1E9PL57 170 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 FAM72CH0Y354 149 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 NARSO43776 548 aaKnown RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 KRT1P04264 644 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 ADH5P11766 374 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 SRFP11831 508 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 L1CAMP32004 1257 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 CTNNA1P35221 906 aaKnown RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 ARL4AP40617 200 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 SGSHP51688 502 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 CDH6P55285 790 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 TPI1P60174 286 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 NRG1Q02297 640 aaPredicted RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 DPYSL2Q16555 572 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 ITPRIPL2Q3MIP1 535 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 ATP13A4Q4VNC1 1196 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 ZNF569Q5MCW4 686 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 FAM72AQ5TYM5 149 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 TTC39BQ5VTQ0 682 aaPredicted RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 FAM72DQ6L9T8 149 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 RHBDF2Q6PJF5 856 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 C14orf80Q86SX3 495 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 FAM72BQ86X60 149 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 RNF135Q8IUD6 432 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 GJD3Q8N144 294 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 UBL4BQ8N7F7 174 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 CD101Q93033 1021 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 DDX56Q9NY93 547 aaKnown RBP15.74■□□□□ 0.11
TPM1-206ENST00000358278 PLK2Q9NYY3 685 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 SORCS3Q9UPU3 1222 aa15.74■□□□□ 0.11
TPM1-206ENST00000358278 LRRD1A4D1F6 860 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 MIF4GDA9UHW6 222 aaKnown RBP15.73■□□□□ 0.11
TPM1-206ENST00000358278 ARNTLO00327 626 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 EEF2KO00418 725 aaKnown RBP15.73■□□□□ 0.11
TPM1-206ENST00000358278 TBL1XO60907 577 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 LRIG2O94898 1065 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 MARCKSL1P49006 195 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 DNA2P51530 1060 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 RPS24P62847 133 aaKnown RBP15.73■□□□□ 0.11
TPM1-206ENST00000358278 PFKPQ01813 784 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 MAP7D3Q8IWC1 876 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 CFAP52Q8N1V2 620 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 TTC8Q8TAM2 541 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 KRT35Q92764 455 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 DNASE1L2Q92874 299 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 TBC1D31Q96DN5 1066 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 MYEOVQ96EZ4 313 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 CALN1Q9BXU9 219 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 STIM2Q9P246 746 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 DUSP12Q9UNI6 340 aa15.73■□□□□ 0.11
TPM1-206ENST00000358278 TTC28Q96AY4 2481 aa15.72■□□□□ 0.11
TPM1-206ENST00000358278 OTOL1A6NHN0 477 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms