RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 RRN3Q9NYV6 651 aa21.24■□□□□ 0.99
PPP1CA-202ENST00000358239 MBD1Q9UIS9 605 aaPredicted RBP21.24■□□□□ 0.99
PPP1CA-202ENST00000358239 KCNU1A8MYU2 1149 aa21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 MOCS2O96007 188 aaPredicted RBP21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 ATP5BP06576 529 aaKnown RBP21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 ABCB4P21439 1286 aa21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 CCR1P32246 355 aa21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 SCNN1AP37088 669 aa21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 DHPSP49366 369 aaPredicted RBP21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 COPB1P53618 953 aaKnown RBP21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 FUT11Q495W5 492 aa21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 ZC3H12AQ5D1E8 599 aaKnown RBP21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 ADIPOR2Q86V24 386 aa21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 EPS8L1Q8TE68 723 aa21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 DDX1Q92499 740 aaKnown RBP21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 NUCKS1Q9H1E3 243 aaKnown RBP21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 PRDM16Q9HAZ2 1276 aa21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 DDIT4Q9NX09 232 aa21.23■□□□□ 0.99
PPP1CA-202ENST00000358239 LRRC10BA6NIK2 292 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 LGALS16A8MUM7 142 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 SLC30A4O14863 429 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 ZNF18P17022 549 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 POLR2EP19388 210 aaKnown RBP21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 CDK11BP21127 795 aaKnown RBP21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 NOS2P35228 1153 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 GABRB2P47870 512 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 ATXN1P54253 815 aaKnown RBP21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 TYRO3Q06418 890 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 CDH18Q13634 790 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 SF3A2Q15428 464 aaKnown RBP21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 CCDC6Q16204 474 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 TTC39BQ5VTQ0 682 aaPredicted RBP21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 C18orf8Q96DM3 657 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 FAM207AQ9NSI2 230 aaPredicted RBP21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 STAP1Q9ULZ2 295 aa21.22■□□□□ 0.99
PPP1CA-202ENST00000358239 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 IGHV1OR15-9A0A0B4J2B8 117 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 F5H5T6 163 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 GRAP2O75791 330 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 LUC7L3O95232 432 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 EPHX1P07099 455 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 DLDP09622 509 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 TACR2P21452 398 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 CD70P32970 193 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 HOXD12P35452 270 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 MATKP42679 507 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 JAM2P57087 298 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 POLR2FP61218 127 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 RPS24P62847 133 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 RPL6Q02878 288 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 LYSMD4Q5XG99 296 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 MBLAC2Q68D91 279 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 KIAA1324Q6UXG2 1013 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 NOP9Q86U38 636 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 CHSY1Q86X52 802 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 ERICH1Q86X53 443 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 TMEFF1Q8IYR6 380 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 FRMD1Q8N878 549 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 SORCS1Q8WY21 1168 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 RNF34Q969K3 372 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 SPAG5Q96R06 1193 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 TMEM245Q9H330 911 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 FBRSQ9HAH7 460 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 TMEM63CQ9P1W3 806 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 STIM2Q9P246 746 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 SIK3Q9Y2K2 1263 aa21.21■□□□□ 0.99
PPP1CA-202ENST00000358239 NUMA1Q14980 2115 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 ASLP04424 464 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 PRKCHP24723 683 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 SOX5P35711 763 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 PITX1P78337 314 aaPredicted RBP21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 NCAPHQ15003 741 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 PTPRNQ16849 979 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 FNDC3BQ53EP0 1204 aaKnown RBP21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 TAF3Q5VWG9 929 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 RAP1GAP2Q684P5 730 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 LGI2Q8N0V4 545 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 CARNMT1Q8N4J0 409 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 WFDC5Q8TCV5 224 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 PRCCQ92733 491 aaPredicted RBP21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 LMLNQ96KR4 655 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 BPIFA3Q9BQP9 254 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 MKRN2Q9H000 416 aaKnown RBP21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 XPO7Q9UIA9 1087 aaKnown RBP21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 CYP8B1Q9UNU6 501 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 PAXBP1Q9Y5B6 917 aa21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 ASCC3Q8N3C0 2202 aaKnown RBP21.2■□□□□ 0.98
PPP1CA-202ENST00000358239 H0Y626 953 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 KHNYNO15037 678 aaKnown RBP21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 GDF9O60383 454 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 MOCS3O95396 460 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 STAT1P42224 750 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 PTGER3P43115 390 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 KLK7P49862 253 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 CDR2Q01850 454 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 UBXN1Q04323 297 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 CAMK2GQ13555 558 aaPredicted RBP21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 SYCP1Q15431 976 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 RABGAP1LQ5R372 815 aa21.19■□□□□ 0.98
PPP1CA-202ENST00000358239 TMPRSS6Q8IU80 811 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms