RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 SERPINB6P35237 376 aa26.45■■□□□ 1.83
CLK2-201ENST00000355560 ELK3P41970 407 aa26.45■■□□□ 1.83
CLK2-201ENST00000355560 LRRC31Q6UY01 552 aa26.45■■□□□ 1.83
CLK2-201ENST00000355560 C3orf62Q6ZUJ4 267 aa26.45■■□□□ 1.83
CLK2-201ENST00000355560 PALM2Q8IXS6 379 aa26.45■■□□□ 1.83
CLK2-201ENST00000355560 HAPLN3Q96S86 360 aa26.45■■□□□ 1.83
CLK2-201ENST00000355560 OXCT2Q9BYC2 517 aaPredicted RBP26.45■■□□□ 1.83
CLK2-201ENST00000355560 CEP41Q9BYV8 373 aa26.45■■□□□ 1.83
CLK2-201ENST00000355560 CWH43Q9H720 699 aa26.45■■□□□ 1.83
CLK2-201ENST00000355560 EURLQ9NYK6 297 aa26.45■■□□□ 1.83
CLK2-201ENST00000355560 DUSP4Q13115 394 aa26.45■■□□□ 1.82
CLK2-201ENST00000355560 SEMA5AQ13591 1074 aa26.45■■□□□ 1.82
CLK2-201ENST00000355560 PPP2R5DQ14738 602 aa26.45■■□□□ 1.82
CLK2-201ENST00000355560 RWDD4Q6NW29 188 aaKnown RBP26.45■■□□□ 1.82
CLK2-201ENST00000355560 FBXO32Q969P5 355 aa26.45■■□□□ 1.82
CLK2-201ENST00000355560 COL4A6Q14031 1691 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 FAM92AA1XBS5 289 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 POC1B-GALNT4F8VUJ3 575 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 NCAM2O15394 837 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 OPHN1O60890 802 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 GCAP28676 217 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 IGDCC3Q8IVU1 814 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 CYP4X1Q8N118 509 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 RIBC1Q8N443 379 aaPredicted RBP26.44■■□□□ 1.82
CLK2-201ENST00000355560 MDM1Q8TC05 714 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 NEU3Q9UQ49 428 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 TEX264Q9Y6I9 313 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 F5H423 210 aaPredicted RBP26.44■■□□□ 1.82
CLK2-201ENST00000355560 RTN3O95197 1032 aaPredicted RBP26.44■■□□□ 1.82
CLK2-201ENST00000355560 HAPLN1P10915 354 aaPredicted RBP26.44■■□□□ 1.82
CLK2-201ENST00000355560 TPSB2P20231 275 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 WASHC5Q12768 1159 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 TPSAB1Q15661 275 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 USP41Q3LFD5 358 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 MSANTD2Q6P1R3 559 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 CAND1Q86VP6 1230 aaKnown RBP26.44■■□□□ 1.82
CLK2-201ENST00000355560 COLGALT1Q8NBJ5 622 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 MCUQ8NE86 351 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 FBXO22Q8NEZ5 403 aa26.44■■□□□ 1.82
CLK2-201ENST00000355560 C2orf15Q8WU43 125 aaKnown RBP26.44■■□□□ 1.82
CLK2-201ENST00000355560 GREB1Q4ZG55 1949 aa26.43■■□□□ 1.82
CLK2-201ENST00000355560 KCNK1O00180 336 aa26.43■■□□□ 1.82
CLK2-201ENST00000355560 MOCS2O96007 188 aaPredicted RBP26.43■■□□□ 1.82
CLK2-201ENST00000355560 ATP2A2P16615 1042 aaKnown RBP26.43■■□□□ 1.82
CLK2-201ENST00000355560 RFC2P35250 354 aa26.43■■□□□ 1.82
CLK2-201ENST00000355560 GJA8P48165 433 aa26.43■■□□□ 1.82
CLK2-201ENST00000355560 TMED2Q15363 201 aa26.43■■□□□ 1.82
CLK2-201ENST00000355560 FBXO46Q6PJ61 603 aaPredicted RBP26.43■■□□□ 1.82
CLK2-201ENST00000355560 AGGF1Q8N302 714 aaeCLIP26.43■■□□□ 1.82
CLK2-201ENST00000355560 IGSF21Q96ID5 467 aa26.43■■□□□ 1.82
CLK2-201ENST00000355560 PAWRQ96IZ0 340 aaKnown RBP26.43■■□□□ 1.82
CLK2-201ENST00000355560 FCRL2Q96LA5 508 aaPredicted RBP26.43■■□□□ 1.82
CLK2-201ENST00000355560 VN1R3Q9BXE9 311 aa26.43■■□□□ 1.82
CLK2-201ENST00000355560 NUP205Q92621 2012 aa26.43■■□□□ 1.82
CLK2-201ENST00000355560 LTBP2Q14767 1821 aa26.43■■□□□ 1.82
CLK2-201ENST00000355560 EFEMP2O95967 443 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 MX2P20592 715 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 FDFT1P37268 417 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 PPIDQ08752 370 aaKnown RBP26.42■■□□□ 1.82
CLK2-201ENST00000355560 LRRC26Q2I0M4 334 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 TMCO2Q7Z6W1 182 aaPredicted RBP26.42■■□□□ 1.82
CLK2-201ENST00000355560 SPATA17Q96L03 361 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 RABGEF1Q9UJ41 708 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 TLR6Q9Y2C9 796 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 WDR27A2RRH5 827 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 FOXO6A8MYZ6 492 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 ADAM12O43184 909 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 RPL17P18621 184 aaKnown RBP26.42■■□□□ 1.82
CLK2-201ENST00000355560 GALNT2Q10471 571 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 TAF10Q12962 218 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 PSMD5Q16401 504 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 ZNF534Q76KX8 674 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 TDRPQ86YL5 185 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 ZNF567Q8N184 647 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 FBF1Q8TES7 1133 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 HDAC11Q96DB2 347 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 RABEP2Q9H5N1 569 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 C11orf49Q9H6J7 331 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 MTRRQ9UBK8 725 aa26.42■■□□□ 1.82
CLK2-201ENST00000355560 KCNU1A8MYU2 1149 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 CHN1P15882 459 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 TSHRP16473 764 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 GARSP41250 739 aaKnown RBP26.41■■□□□ 1.82
CLK2-201ENST00000355560 CBLBQ13191 982 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 SPOUT1Q5T280 376 aaKnown RBP26.41■■□□□ 1.82
CLK2-201ENST00000355560 SLC8B1Q6J4K2 584 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 RNF168Q8IYW5 571 aaPredicted RBP26.41■■□□□ 1.82
CLK2-201ENST00000355560 TOP1MTQ969P6 601 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 ACSS3Q9H6R3 686 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 PPCSQ9HAB8 311 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 TLR8Q9NR97 1041 aaKnown RBP26.41■■□□□ 1.82
CLK2-201ENST00000355560 ZNF189O75820 626 aaPredicted RBP26.41■■□□□ 1.82
CLK2-201ENST00000355560 EFTUD2Q15029 972 aaKnown RBP eCLIP26.41■■□□□ 1.825e-8■■■□□ 15.3
CLK2-201ENST00000355560 MANEALQ5VSG8 457 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 FAM117BQ6P1L5 589 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 ANKLE1Q8NAG6 615 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 DEPDC1BQ8WUY9 529 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 MRRFQ96E11 262 aaKnown RBP26.41■■□□□ 1.82
CLK2-201ENST00000355560 CELF6Q96J87 481 aaKnown RBP26.41■■□□□ 1.82
CLK2-201ENST00000355560 BRD8Q9H0E9 1235 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms